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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 1
  • cytosol 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G060700.2 Wheat nucleus 87.6 85.48
TraesCS6D01G051600.2 Wheat nucleus 85.95 83.87
Os02t0116600-01 Rice cytosol 66.53 68.22
KXG29296 Sorghum cytosol, mitochondrion, nucleus 64.88 67.97
Zm00001d054038_P003 Maize nucleus 63.22 65.95
Zm00001d014995_P001 Maize nucleus 63.22 64.83
GSMUA_Achr7P04180_001 Banana nucleus 52.48 56.19
GSMUA_Achr4P05280_001 Banana nucleus 50.0 52.84
GSMUA_Achr4P05310_001 Banana nucleus 50.0 52.84
TraesCS1A01G281300.1 Wheat cytosol, mitochondrion, nucleus 39.67 40.0
TraesCS7A01G307700.1 Wheat nucleus 39.67 40.0
TraesCS2A01G215600.1 Wheat nucleus 40.5 39.04
TraesCS6A01G204300.1 Wheat nucleus 26.03 19.5
Protein Annotations
EnsemblPlants:TraesCS6A01G045100.1EnsemblPlantsGene:TraesCS6A01G045100Gene3D:4.10.280.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638InterPro:bHLH_domncoils:Coil
PANTHER:PTHR23042PANTHER:PTHR23042:SF66PFAM:PF00010PFscan:PS50888SMART:SM00353SUPFAM:SSF47459
TIGR:cd00083MapMan:15.5.32MapMan:25.4.1.2:::
Description
No Description!
Coordinates
chr6A:+:23409174..23410981
Molecular Weight (calculated)
26328.6 Da
IEP (calculated)
9.050
GRAVY (calculated)
-0.572
Length
242 amino acids
Sequence
(BLAST)
001: MILLCPSSFS NGHNCVLGML CRAPGLLARL GIEDVSGGDS GLGHSNLGKR ARDEPSSSGP KSKACREKMR RDKLNDRFLE LCSVMNSGKH SGLEECSASN
101: PGKNAKLDKA SILSDATRML TQLRGETEKL KESNSNLRET IKDLKVEKNE LRDEKLSLKA EKERLEQQLK AASAAPTGFA PHMPYPAAFH PAVYPPFAPP
201: YQVPANKGAP VPAAFPGMAM WHWLPPTAMD TTQDPKLWPP NA
Best Arabidopsis Sequence Match ( AT4G14410.2 )
(BLAST)
001: MDVNLFGHDD SCSNGAELDD YTQFGVNLQT DQEDTFPDFV SYGVNLQQEP DEVFSIGASQ LDLSSYNGVL SLEPEQVGQQ DCEVVQEEEV EINSGSSGGA
101: VKEEQEHLDD DCSRKRARTG SCSRGGGTKA CRERLRREKL NERFMDLSSV LEPGRTPKTD KPAILDDAIR ILNQLRDEAL KLEETNQKLL EEIKSLKAEK
201: NELREEKLVL KADKEKTEQQ LKSMTAPSSG FIPHIPAAFN HNKMAVYPSY GYMPMWHYMP QSVRDTSRDQ ELRPPAA
Arabidopsis Description
BHLH104Transcription factor bHLH104 [Source:UniProtKB/Swiss-Prot;Acc:Q8L467]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.