Factsheet for GSMUA_Achr3P23080_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	42.17	75.78
Zm00001d027911_P001	Maize	mitochondrion	27.83	67.37
GSMUA_Achr8P33180_001	Banana	nucleus	65.65	66.81
GSMUA_Achr11P...	Banana	cytosol	51.74	65.03
TraesCS7D01G304500.1	Wheat	nucleus	56.96	54.58
TraesCS7A01G307700.1	Wheat	nucleus	56.96	54.58
TraesCS7B01G208000.1	Wheat	nucleus	56.52	54.17
KXG24376	Sorghum	nucleus	58.7	54.0
Os08t0138500-01	Rice	nucleus	58.7	53.36
Zm00001d024679_P002	Maize	nucleus	58.26	52.14
GSMUA_Achr10P...	Banana	cytosol	30.43	48.28
GSMUA_Achr7P10830_001	Banana	cytosol, nucleus, plastid	29.57	47.55
HORVU7Hr1G073310.5	Barley	cytosol	50.43	46.96
Zm00001d046173_P001	Maize	nucleus	33.48	46.11
GSMUA_Achr4P05310_001	Banana	nucleus	45.22	45.41
Zm00001d046571_P001	Maize	cytosol	41.3	44.6
Zm00001d049384_P001	Maize	cytosol	41.3	44.6
GSMUA_Achr4P05280_001	Banana	nucleus	44.35	44.54
GSMUA_Achr10P...	Banana	plastid	35.22	44.51
GSMUA_Achr7P04180_001	Banana	nucleus	43.48	44.25
GSMUA_Achr2P16550_001	Banana	cytosol	40.0	40.0

Protein Annotations

EnsemblPlants:GSMUA_Achr3P23080_001	EnsemblPlants:GSMUA_Achr3T23080_001	EnsemblPlantsGene:GSMUA_Achr3G23080_001	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
ncoils:Coil	PANTHER:PTHR23042	PANTHER:PTHR23042:SF78	PFAM:PF00010	PFscan:PS50888	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000296E494	UniProt:M0SH24	MapMan:15.5.32	MapMan:25.4.1.2	:

Description

Transcription factor ILR3 [Source:GMGC_GENE;Acc:GSMUA_Achr3G23080_001]

Coordinates

chr3:+:23866729..23871859

Molecular Weight (calculated)

25362.8 Da

IEP (calculated)

5.024

GRAVY (calculated)

-0.729

Length

230 amino acids

Sequence
(BLAST)

001: MGSTENPNWF LDCSLIDDIP DAGADFGWNP QGFDPASSVS VEIDSSFVNS DGLKEPGSAK RSRSESCSNP ASKACREKMR RERLNDRFLE LNSLLDPGNP
101: PKMDKAAILS DAARLVTQLR NEAQKLKESN ESLQEKIKEL KAEKNELRDE KQKLKAERGS LEQQVKLLNA RSSYVPQPPL VPTPYGAQGQ AAGHKLMVPI
201: IGFPGFPMWQ YMPPSDVDTS QDADKCSPVA

Best Arabidopsis Sequence Match ( AT5G54680.1 )
(BLAST)

001: MVSPENANWI CDLIDADYGS FTIQGPGFSW PVQQPIGVSS NSSAGVDGSA GNSEASKEPG SKKRGRCESS SATSSKACRE KQRRDRLNDK FMELGAILEP
101: GNPPKTDKAA ILVDAVRMVT QLRGEAQKLK DSNSSLQDKI KELKTEKNEL RDEKQRLKTE KEKLEQQLKA MNAPQPSFFP APPMMPTAFA SAQGQAPGNK
201: MVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA

Arabidopsis Description

ILR3Transcription factor ILR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH37]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.