Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P10830_001 | Banana | cytosol, nucleus, plastid | 75.86 | 76.92 |
| Os05t0455400-01 | Rice | cytosol | 52.41 | 51.35 |
| GSMUA_Achr10P... | Banana | plastid | 62.76 | 50.0 |
| GSMUA_Achr2P16550_001 | Banana | cytosol | 75.86 | 47.83 |
| GSMUA_Achr10P... | Banana | cytosol | 37.93 | 42.97 |
| EES18337 | Sorghum | nucleus | 59.31 | 35.68 |
| VIT_05s0049g00460.t01 | Wine grape | cytosol, nucleus, plasma membrane | 53.1 | 35.48 |
| Bra023751.1-P | Field mustard | nucleus | 37.93 | 35.26 |
| TraesCS1A01G281300.1 | Wheat | cytosol, mitochondrion, nucleus | 57.24 | 34.58 |
| HORVU1Hr1G072810.2 | Barley | nucleus | 56.55 | 34.45 |
| TraesCS1D01G280600.1 | Wheat | cytosol, mitochondrion, nucleus | 57.24 | 34.44 |
| TraesCS1B01G290500.1 | Wheat | cytosol | 57.24 | 34.3 |
| VIT_14s0081g00720.t01 | Wine grape | nucleus | 48.97 | 32.87 |
| KRH31712 | Soybean | cytosol, mitochondrion, nucleus | 48.28 | 32.11 |
| KRG90395 | Soybean | cytosol, mitochondrion, nucleus | 48.28 | 31.82 |
| GSMUA_Achr7P04180_001 | Banana | nucleus | 47.59 | 30.53 |
| GSMUA_Achr3P23080_001 | Banana | nucleus | 48.28 | 30.43 |
| GSMUA_Achr4P05310_001 | Banana | nucleus | 46.9 | 29.69 |
| PGSC0003DMT400044234 | Potato | nucleus | 46.21 | 29.65 |
| Solyc09g089870.2.1 | Tomato | nucleus | 46.21 | 29.65 |
| Zm00001d038357_P001 | Maize | cytosol, nucleus, plastid | 57.93 | 29.47 |
| GSMUA_Achr4P05280_001 | Banana | nucleus | 45.52 | 28.82 |
| GSMUA_Achr8P33180_001 | Banana | nucleus | 44.83 | 28.76 |
| AT4G14410.1 | Thale cress | nucleus | 46.9 | 24.03 |
| CDY49420 | Canola | nucleus | 44.83 | 23.3 |
| CDY12770 | Canola | nucleus | 44.83 | 22.89 |
| Bra041033.1-P | Field mustard | nucleus | 44.83 | 22.81 |
| CDX77539 | Canola | nucleus | 42.76 | 21.38 |
| Bra014923.1-P | Field mustard | nucleus | 42.76 | 21.38 |
| GSMUA_Achr11P... | Banana | cytosol | 26.9 | 21.31 |
| AT3G23210.1 | Thale cress | nucleus | 44.83 | 20.31 |
| CDX85069 | Canola | nucleus | 42.07 | 19.93 |
| CDY08983 | Canola | nucleus | 39.31 | 19.26 |
| CDY35510 | Canola | nucleus | 37.93 | 18.71 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P26530_001 | EnsemblPlants:GSMUA_Achr10T26530_001 | EnsemblPlantsGene:GSMUA_Achr10G26530_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | ncoils:Coil | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF72 | SEG:seg | UniParc:UPI000295851C |
| UniProt:M0RLM7 | MapMan:15.5.32 | MapMan:25.4.1.2 | : | : | : |
Description
Transcription factor bHLH115 [Source:GMGC_GENE;Acc:GSMUA_Achr10G26530_001]
Coordinates
chr10:+:30042715..30043585
Molecular Weight (calculated)
16493.1 Da
IEP (calculated)
9.058
GRAVY (calculated)
-0.399
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLHRFTDLC SIMDPGKPPK TDKFAILSDA TRLLNQLRLE AKKFRESNEA LQDAIKNLKA EKLELRDEKL RLKAEKEQIE QMLKAIRIAP QFITEPSAAT
101: LHAASIAAYS KTIPYPNYLP ADMWQWIPPA ALDTSQDHVL RPPVA
101: LHAASIAAYS KTIPYPNYLP ADMWQWIPPA ALDTSQDHVL RPPVA
001: MVSPENTNWL SDYPLIEGAF SDQNPTFPWQ IDGSATVSVE VDGFLCDADV IKEPSSRKRI KTESCTGSNS KACREKQRRD RLNDKFTELS SVLEPGRTPK
101: TDKVAIINDA IRMVNQARDE AQKLKDLNSS LQEKIKELKD EKNELRDEKQ KLKVEKERID QQLKAIKTQP QPQPCFLPNP QTLSQAQAPG SKLVPFTTYP
201: GFAMWQFMPP AAVDTSQDHV LRPPVA
101: TDKVAIINDA IRMVNQARDE AQKLKDLNSS LQEKIKELKD EKNELRDEKQ KLKVEKERID QQLKAIKTQP QPQPCFLPNP QTLSQAQAPG SKLVPFTTYP
201: GFAMWQFMPP AAVDTSQDHV LRPPVA
Arabidopsis Description
bHLH115Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I7Z3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.