Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023751.1-P | Field mustard | nucleus | 51.7 | 97.44 |
| CDY08983 | Canola | nucleus | 95.24 | 94.59 |
| CDX77539 | Canola | nucleus | 79.93 | 81.03 |
| CDX85069 | Canola | nucleus | 76.87 | 73.86 |
| AT3G23210.1 | Thale cress | nucleus | 70.07 | 64.38 |
| CDY49420 | Canola | nucleus | 56.46 | 59.5 |
| CDY12770 | Canola | nucleus | 57.14 | 59.15 |
| KRG90395 | Soybean | cytosol, mitochondrion, nucleus | 38.44 | 51.36 |
| Solyc09g089870.2.1 | Tomato | nucleus | 37.41 | 48.67 |
| KRH31712 | Soybean | cytosol, mitochondrion, nucleus | 36.05 | 48.62 |
| VIT_05s0049g00460.t01 | Wine grape | cytosol, nucleus, plasma membrane | 35.71 | 48.39 |
| PGSC0003DMT400044234 | Potato | nucleus | 37.07 | 48.23 |
| GSMUA_Achr7P10830_001 | Banana | cytosol, nucleus, plastid | 19.73 | 40.56 |
| CDY28758 | Canola | nucleus | 31.29 | 39.15 |
| CDY41004 | Canola | nucleus | 30.95 | 38.72 |
| CDY47456 | Canola | nucleus | 30.61 | 38.63 |
| CDY42475 | Canola | nucleus | 30.61 | 38.63 |
| GSMUA_Achr10P... | Banana | cytosol | 18.71 | 37.93 |
| CDY43809 | Canola | nucleus | 30.61 | 37.82 |
| CDY43028 | Canola | nucleus | 30.61 | 37.82 |
| CDY71937 | Canola | cytosol, nucleus | 27.89 | 37.44 |
| GSMUA_Achr10P... | Banana | plastid | 22.79 | 36.81 |
| CDY35576 | Canola | nucleus | 28.23 | 36.4 |
| Os05t0455400-01 | Rice | cytosol | 17.01 | 33.78 |
| GSMUA_Achr2P16550_001 | Banana | cytosol | 25.85 | 33.04 |
| EES18337 | Sorghum | nucleus | 26.53 | 32.37 |
| HORVU1Hr1G072810.2 | Barley | nucleus | 25.85 | 31.93 |
| TraesCS1A01G281300.1 | Wheat | cytosol, mitochondrion, nucleus | 25.51 | 31.25 |
| TraesCS1B01G290500.1 | Wheat | cytosol | 25.51 | 30.99 |
| TraesCS1D01G280600.1 | Wheat | cytosol, mitochondrion, nucleus | 25.17 | 30.71 |
| Zm00001d038357_P001 | Maize | cytosol, nucleus, plastid | 27.21 | 28.07 |
| CDX72574 | Canola | nucleus | 17.35 | 20.82 |
| CDY42214 | Canola | mitochondrion, nucleus | 22.79 | 20.06 |
| CDY47051 | Canola | nucleus | 16.33 | 19.59 |
| CDY33424 | Canola | nucleus | 23.47 | 18.9 |
| CDY68426 | Canola | nucleus | 15.99 | 18.5 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.2 | Gene3D:4.10.280.10 | GO:A0A078HAQ3 | UniProt:A0A078HAQ3 | EnsemblPlants:CDY35510 |
| ProteinID:CDY35510 | ProteinID:CDY35510.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00058547001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF72 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE14E4 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
BnaA01g24020DBnaA01g24020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAQ3]
Coordinates
chrLK032353:-:244747..246169
Molecular Weight (calculated)
33084.9 Da
IEP (calculated)
4.621
GRAVY (calculated)
-0.780
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MMYQSNEEDD DLLASLCFDQ SNGGEDPYGF MQTDQENLFP EFDVNLLPEE EQVCNNIGDQ FDAFSGNLDS NGLGPFGGSS QLDMGTHQVC SFRGTATHVQ
101: QGQACCPVVE INSSSSVEIV KEEFEEECSR KRGRTGPCRK PGTKACREKK RRELLNDKFM DLSSVLEPTR TPKTDKPVIL DDAIRVVNHL RGEAHELKET
201: NQKLLEEIKS LKAEKNELRE EKMVLKSDKE KMEQQMRSMA AVPSPGFMPA AFHQNKMAVY GSYGYYPNIP MMPYLLPPSQ RDTSQDQENC SKAA
101: QGQACCPVVE INSSSSVEIV KEEFEEECSR KRGRTGPCRK PGTKACREKK RRELLNDKFM DLSSVLEPTR TPKTDKPVIL DDAIRVVNHL RGEAHELKET
201: NQKLLEEIKS LKAEKNELRE EKMVLKSDKE KMEQQMRSMA AVPSPGFMPA AFHQNKMAVY GSYGYYPNIP MMPYLLPPSQ RDTSQDQENC SKAA
001: MYPSIEDDDD LLAALCFDQS NGVEDPYGYM QTNEDNIFQD FGSCGVNLMQ PQQEQFDSFN GNLEQVCSSF RGGNNGVVYS SSIGSAQLDL AASFSGVLQQ
101: ETHQVCGFRG QNDDSAVPHL QQQQGQVFSG VVEINSSSSV GAVKEEFEEE CSGKRRRTGS CSKPGTKACR EKLRREKLND KFMDLSSVLE PGRTPKTDKS
201: AILDDAIRVV NQLRGEAHEL QETNQKLLEE IKSLKADKNE LREEKLVLKA EKEKMEQQLK SMVVPSPGFM PSQHPAAFHS HKMAVAYPYG YYPPNMPMWS
301: PLPPADRDTS RDLKNLPPVA
101: ETHQVCGFRG QNDDSAVPHL QQQQGQVFSG VVEINSSSSV GAVKEEFEEE CSGKRRRTGS CSKPGTKACR EKLRREKLND KFMDLSSVLE PGRTPKTDKS
201: AILDDAIRVV NQLRGEAHEL QETNQKLLEE IKSLKADKNE LREEKLVLKA EKEKMEQQLK SMVVPSPGFM PSQHPAAFHS HKMAVAYPYG YYPPNMPMWS
301: PLPPADRDTS RDLKNLPPVA
Arabidopsis Description
BHLH34Transcription factor bHLH34 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.