Skip to main content
crop-pal logo
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023751.1-P Field mustard nucleus 38.12 78.21
CDX85069 Canola nucleus 71.88 75.16
Bra014923.1-P Field mustard nucleus 64.06 70.69
CDX77539 Canola nucleus 64.06 70.69
CDY08983 Canola nucleus 65.31 70.61
CDY35510 Canola nucleus 64.38 70.07
AT4G14410.1 Thale cress nucleus 57.5 65.02
Solyc09g089870.2.1 Tomato nucleus 37.81 53.54
KRG90395 Soybean cytosol, mitochondrion, nucleus 36.56 53.18
PGSC0003DMT400044234 Potato nucleus 36.88 52.21
VIT_05s0049g00460.t01 Wine grape cytosol, nucleus, plasma membrane 34.69 51.15
KRH31712 Soybean cytosol, mitochondrion, nucleus 34.69 50.92
GSMUA_Achr7P10830_001 Banana cytosol, nucleus, plastid 20.31 45.45
GSMUA_Achr10P... Banana cytosol 20.31 44.83
AT5G54680.1 Thale cress nucleus 31.88 43.59
GSMUA_Achr10P... Banana plastid 22.81 40.11
Os05t0455400-01 Rice cytosol 18.44 39.86
HORVU1Hr1G072810.2 Barley nucleus 27.81 37.4
EES18337 Sorghum nucleus 28.12 37.34
TraesCS1A01G281300.1 Wheat cytosol, mitochondrion, nucleus 27.5 36.67
TraesCS1B01G290500.1 Wheat cytosol 27.5 36.36
TraesCS1D01G280600.1 Wheat cytosol, mitochondrion, nucleus 27.19 36.1
GSMUA_Achr2P16550_001 Banana cytosol 25.94 36.09
AT1G51070.2 Thale cress cytosol, endoplasmic reticulum, nucleus 30.62 33.56
Zm00001d038357_P001 Maize cytosol, nucleus, plastid 28.75 32.28
AT3G19860.2 Thale cress nucleus 19.38 18.4
AT4G36060.3 Thale cress nucleus, plastid 15.0 16.72
Protein Annotations
MapMan:15.5.32MapMan:25.4.1.2Gene3D:4.10.280.10EntrezGene:821899UniProt:A0A178VFY4ProteinID:AEE76735.1
EMBL:AF488573ArrayExpress:AT3G23210EnsemblPlantsGene:AT3G23210RefSeq:AT3G23210TAIR:AT3G23210RefSeq:AT3G23210-TAIR-G
EnsemblPlants:AT3G23210.1TAIR:AT3G23210.1EMBL:AY099674EMBL:AY128853Unigene:At.6338ProteinID:BAA95734.1
ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009791GO:GO:0009987GO:GO:0010030GO:GO:0019725GO:GO:0043565GO:GO:0046983
GO:GO:0071333InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638RefSeq:NP_001327796.1RefSeq:NP_188962.2
ProteinID:OAP05229.1PFAM:PF00010PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230
PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281
PFscan:PS50888PANTHER:PTHR23042PANTHER:PTHR23042:SF72UniProt:Q9LTC7SMART:SM00353SUPFAM:SSF47459
UniParc:UPI00000A823ESymbol:bHLH34InterPro:bHLH_domSEG:seg::
Description
BHLH34Transcription factor bHLH34 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC7]
Coordinates
chr3:-:8283003..8285081
Molecular Weight (calculated)
35578.7 Da
IEP (calculated)
4.772
GRAVY (calculated)
-0.693
Length
320 amino acids
Sequence
(BLAST)
001: MYPSIEDDDD LLAALCFDQS NGVEDPYGYM QTNEDNIFQD FGSCGVNLMQ PQQEQFDSFN GNLEQVCSSF RGGNNGVVYS SSIGSAQLDL AASFSGVLQQ
101: ETHQVCGFRG QNDDSAVPHL QQQQGQVFSG VVEINSSSSV GAVKEEFEEE CSGKRRRTGS CSKPGTKACR EKLRREKLND KFMDLSSVLE PGRTPKTDKS
201: AILDDAIRVV NQLRGEAHEL QETNQKLLEE IKSLKADKNE LREEKLVLKA EKEKMEQQLK SMVVPSPGFM PSQHPAAFHS HKMAVAYPYG YYPPNMPMWS
301: PLPPADRDTS RDLKNLPPVA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.