Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35510 | Canola | nucleus | 94.59 | 95.24 |
| CDX77539 | Canola | nucleus | 79.05 | 80.69 |
| CDX85069 | Canola | nucleus | 77.36 | 74.84 |
| AT3G23210.1 | Thale cress | nucleus | 70.61 | 65.31 |
| CDY49420 | Canola | nucleus | 56.76 | 60.22 |
| CDY12770 | Canola | nucleus | 57.43 | 59.86 |
| KRG90395 | Soybean | cytosol, mitochondrion, nucleus | 37.5 | 50.45 |
| Solyc09g089870.2.1 | Tomato | nucleus | 37.84 | 49.56 |
| VIT_05s0049g00460.t01 | Wine grape | cytosol, nucleus, plasma membrane | 36.15 | 49.31 |
| PGSC0003DMT400044234 | Potato | nucleus | 37.5 | 49.12 |
| KRH31712 | Soybean | cytosol, mitochondrion, nucleus | 35.14 | 47.71 |
| GSMUA_Achr7P10830_001 | Banana | cytosol, nucleus, plastid | 19.93 | 41.26 |
| CDY28758 | Canola | nucleus | 32.09 | 40.43 |
| CDY41004 | Canola | nucleus | 31.42 | 39.57 |
| CDY47456 | Canola | nucleus | 31.08 | 39.48 |
| CDY42475 | Canola | nucleus | 31.08 | 39.48 |
| GSMUA_Achr10P... | Banana | cytosol | 19.26 | 39.31 |
| CDY71937 | Canola | cytosol, nucleus | 28.72 | 38.81 |
| CDY43809 | Canola | nucleus | 31.08 | 38.66 |
| CDY43028 | Canola | nucleus | 31.08 | 38.66 |
| CDY35576 | Canola | nucleus | 29.05 | 37.72 |
| GSMUA_Achr10P... | Banana | plastid | 22.97 | 37.36 |
| Os05t0455400-01 | Rice | cytosol | 17.23 | 34.46 |
| GSMUA_Achr2P16550_001 | Banana | cytosol | 26.01 | 33.48 |
| EES18337 | Sorghum | nucleus | 27.03 | 33.2 |
| HORVU1Hr1G072810.2 | Barley | nucleus | 26.35 | 32.77 |
| TraesCS1A01G281300.1 | Wheat | cytosol, mitochondrion, nucleus | 26.01 | 32.08 |
| TraesCS1B01G290500.1 | Wheat | cytosol | 26.01 | 31.82 |
| TraesCS1D01G280600.1 | Wheat | cytosol, mitochondrion, nucleus | 25.68 | 31.54 |
| Zm00001d038357_P001 | Maize | cytosol, nucleus, plastid | 27.7 | 28.77 |
| CDX72574 | Canola | nucleus | 16.89 | 20.41 |
| CDY42214 | Canola | mitochondrion, nucleus | 22.3 | 19.76 |
| CDY47051 | Canola | nucleus | 15.88 | 19.18 |
| CDY33424 | Canola | nucleus | 22.97 | 18.63 |
| CDY68426 | Canola | nucleus | 15.54 | 18.11 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.2 | Gene3D:4.10.280.10 | GO:A0A078FAX1 | UniProt:A0A078FAX1 | EnsemblPlants:CDY08983 |
| ProteinID:CDY08983 | ProteinID:CDY08983.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00001048001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF72 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EF2BCE |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
BnaC01g31080DBnaC01g31080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAX1]
Coordinates
chrLK031991:-:101480..102899
Molecular Weight (calculated)
33254.1 Da
IEP (calculated)
4.658
GRAVY (calculated)
-0.790
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MMYKSNEDDD DLLASLCFDQ SNGGEDPYGF IQTDQENFFP EFDVNLLPEE EQVCNIGDQF DAFSGNLDSN GLGPFGGSSQ LDLGTHQVCS FRGTATHVQQ
101: GQACCPVVEI NSSSSVEIVK EEFEEECSRK RGRTGPCRKP GTKACREKKR RELLNDKFMD LSSVLEPTRT PKTDKPAILD DAIRVVNQLR GEAYELKETN
201: QKLLEDIKSL KAEKNELREE KMVLKSDKEK MEQQMRSMAA IPSPGFMPSH PAGFHQNKMA VYGSYGYYPN MPMMPYLLPP SQRDTSQDQN NCSKAA
101: GQACCPVVEI NSSSSVEIVK EEFEEECSRK RGRTGPCRKP GTKACREKKR RELLNDKFMD LSSVLEPTRT PKTDKPAILD DAIRVVNQLR GEAYELKETN
201: QKLLEDIKSL KAEKNELREE KMVLKSDKEK MEQQMRSMAA IPSPGFMPSH PAGFHQNKMA VYGSYGYYPN MPMMPYLLPP SQRDTSQDQN NCSKAA
001: MYPSIEDDDD LLAALCFDQS NGVEDPYGYM QTNEDNIFQD FGSCGVNLMQ PQQEQFDSFN GNLEQVCSSF RGGNNGVVYS SSIGSAQLDL AASFSGVLQQ
101: ETHQVCGFRG QNDDSAVPHL QQQQGQVFSG VVEINSSSSV GAVKEEFEEE CSGKRRRTGS CSKPGTKACR EKLRREKLND KFMDLSSVLE PGRTPKTDKS
201: AILDDAIRVV NQLRGEAHEL QETNQKLLEE IKSLKADKNE LREEKLVLKA EKEKMEQQLK SMVVPSPGFM PSQHPAAFHS HKMAVAYPYG YYPPNMPMWS
301: PLPPADRDTS RDLKNLPPVA
101: ETHQVCGFRG QNDDSAVPHL QQQQGQVFSG VVEINSSSSV GAVKEEFEEE CSGKRRRTGS CSKPGTKACR EKLRREKLND KFMDLSSVLE PGRTPKTDKS
201: AILDDAIRVV NQLRGEAHEL QETNQKLLEE IKSLKADKNE LREEKLVLKA EKEKMEQQLK SMVVPSPGFM PSQHPAAFHS HKMAVAYPYG YYPPNMPMWS
301: PLPPADRDTS RDLKNLPPVA
Arabidopsis Description
BHLH34Transcription factor bHLH34 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.