Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G304500.1 | Wheat | nucleus | 88.66 | 91.25 |
| TraesCS7B01G208000.1 | Wheat | nucleus | 87.85 | 90.42 |
| TraesCS7A01G307700.1 | Wheat | nucleus | 87.04 | 89.58 |
| Zm00001d027911_P001 | Maize | mitochondrion | 29.96 | 77.89 |
| KXG24376 | Sorghum | nucleus | 77.33 | 76.4 |
| Os08t0138500-01 | Rice | nucleus | 76.92 | 75.1 |
| Zm00001d024679_P002 | Maize | nucleus | 76.52 | 73.54 |
| Zm00001d046571_P001 | Maize | cytosol | 52.63 | 61.03 |
| Zm00001d049384_P001 | Maize | cytosol | 52.63 | 61.03 |
| Zm00001d046173_P001 | Maize | nucleus | 40.89 | 60.48 |
| GSMUA_Achr10P... | Banana | cytosol | 30.77 | 59.38 |
| GSMUA_Achr3P23080_001 | Banana | nucleus | 46.96 | 50.43 |
| GSMUA_Achr8P33180_001 | Banana | nucleus | 42.51 | 46.46 |
| HORVU1Hr1G072810.2 | Barley | nucleus | 40.49 | 42.02 |
| HORVU2Hr1G044230.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 48.99 | 41.16 |
| GSMUA_Achr11P... | Banana | cytosol | 28.34 | 38.25 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G073310.5 | EnsemblPlantsGene:HORVU7Hr1G073310 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR23042 | PANTHER:PTHR23042:SF60 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000B4845D2 | UniProt:A0A287WVJ8 | MapMan:15.5.32 | MapMan:25.4.1.2 | : |
Description
No Description!
Coordinates
chrchr7H:-:414728992..414733664
Molecular Weight (calculated)
24730.4 Da
IEP (calculated)
5.160
GRAVY (calculated)
-0.565
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLPPTDGGD DWFLDCGILE DLPAAACGAF PWDASVSSSN PSAEVGSYVN NSDVPKDSSS NKRXXXXXXX XXXXXXXXXX XXXXXEKVRR DKLNDRFLEL
101: GTTLDPGKPV KADKAAILSD ATRMVTQLRA EAKQLKDTNG SLEDKIKELK AEKDELRDEK QKLKLEKETL EHQMKLLTAT PAYMPHPTMM HSPFAQAPMA
201: PFHAQGHASA QKLMMPFVGY PGYPMWQLMP PSEVDTSKDS EACPPVA
101: GTTLDPGKPV KADKAAILSD ATRMVTQLRA EAKQLKDTNG SLEDKIKELK AEKDELRDEK QKLKLEKETL EHQMKLLTAT PAYMPHPTMM HSPFAQAPMA
201: PFHAQGHASA QKLMMPFVGY PGYPMWQLMP PSEVDTSKDS EACPPVA
001: MVSPENTNWL SDYPLIEGAF SDQNPTFPWQ IDGSATVSVE VDGFLCDADV IKEPSSRKRI KTESCTGSNS KACREKQRRD RLNDKFTELS SVLEPGRTPK
101: TDKVAIINDA IRMVNQARDE AQKLKDLNSS LQEKIKELKD EKNELRDEKQ KLKVEKERID QQLKAIKTQP QPQPCFLPNP QTLSQAQAPG SKLVPFTTYP
201: GFAMWQFMPP AAVDTSQDHV LRPPVA
101: TDKVAIINDA IRMVNQARDE AQKLKDLNSS LQEKIKELKD EKNELRDEKQ KLKVEKERID QQLKAIKTQP QPQPCFLPNP QTLSQAQAPG SKLVPFTTYP
201: GFAMWQFMPP AAVDTSQDHV LRPPVA
Arabidopsis Description
bHLH115Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I7Z3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.