Factsheet for Os02t0433600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03283	Sorghum	nucleus	67.06	72.78
Zm00001d044216_P002	Maize	nucleus, plastid	65.89	71.52
TraesCS6A01G204300.1	Wheat	nucleus	66.18	70.28
TraesCS6B01G220300.1	Wheat	nucleus	59.48	68.46
TraesCS6D01G185100.1	Wheat	cytosol	63.27	67.18
Bra011658.1-P	Field mustard	cytosol	13.99	57.14
KRH13089	Soybean	nucleus	42.27	51.6
VIT_03s0038g01790.t01	Wine grape	nucleus	48.1	50.15
KRH24147	Soybean	nucleus	39.94	49.82
PGSC0003DMT400004039	Potato	nucleus	47.52	48.8
Solyc01g111130.2.1	Tomato	nucleus	47.23	48.65
KRH43415	Soybean	nucleus	39.65	48.06
CDX72574	Canola	nucleus	28.86	40.41
Bra017745.1-P	Field mustard	nucleus	28.28	39.59
CDY47051	Canola	nucleus	27.41	38.37
CDY68426	Canola	nucleus	27.41	37.01
Os05t0455400-01	Rice	cytosol	15.16	35.14
AT4G36060.3	Thale cress	nucleus, plastid	27.7	33.1
Os02t0116600-01	Rice	cytosol	19.53	28.39
Os07t0543000-01	Rice	nucleus	20.99	28.12
Os08t0138500-01	Rice	nucleus	18.66	25.3

Protein Annotations

MapMan:15.5.32	MapMan:25.4.1.4	Gene3D:4.10.280.10	EntrezGene:4329217	EMBL:AK069790	EMBL:AK103986
ProteinID:BAD38350.1	ProteinID:BAF08644.1	ProteinID:BAS78448.1	ncoils:Coil	ProteinID:EEE56885.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	EMBL:HQ858850	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlantsGene:Os02g0433600
EnsemblPlants:Os02t0433600-01	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR23042	PANTHER:PTHR23042:SF59	UniProt:Q67U21
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0000426535	RefSeq:XP_015626280.1	InterPro:bHLH_dom	SEG:seg

Description

basic helix-loop-helix protein 064Helix-loop-helix DNA-binding domain containing protein. (Os02t0433600-01)

Coordinates

chr2:+:13759250..13767143

Molecular Weight (calculated)

37816.8 Da

IEP (calculated)

5.993

GRAVY (calculated)

-0.883

Length

343 amino acids

Sequence
(BLAST)

001: MDPRSSQAQE DGFFHPRDGA CPADSSGKTE CKTQGSIATR KVQKADREKM RRDRLNEQFQ ELGSTLDPDR PRNDKATILS DAIQMLKDLT SQVNKLKAEY
101: TSLSEEAREL TQEKNELRDE KVSLKFEVDN LNTQYQQRMR VLYPWTGMEP SVVIGPPLPY PFSVPVPVPV PIPSGAVPMH PQLQAYPYFR NQTSGTVSNP
201: CTPYMAYTQP IHPPTDQLSN QFSAPVQHSS SNRSHSMAQD SRSKSSALQQ VSCRGKHDDF DDVATDLELK TPGSSAPLQS EIANKDSSSD LKKKQQFIQE
301: TKGSSLTEGS SSSSRCSSSG PPDVSNSIEG GSVADDQRST VQT

Best Arabidopsis Sequence Match ( AT3G19860.1 )
(BLAST)

001: MDVSARKSQK AGREKLRREK LNEHFVELGN VLDPERPKND KATILTDTVQ LLKELTSEVN KLKSEYTALT DESRELTQEK NDLREEKTSL KSDIENLNLQ
101: YQQRLRSMSP WGAAMDHTVM MAPPPSFPYP MPIAMPPGSI PMHPSMPSYT YFGNQNPSMI PAPCPTYMPY MPPNTVVEQQ SVHIPQNPGN RSREPRAKVS
201: RESRSEKAED SNEVATQLEL KTPGSTSDKD TLQRPEKTKR CKRNNNNNSI EESSHSSKCS SSPSVRDHSS SSSVAGGQKP DDAK

Arabidopsis Description

BHLH121Transcription factor bHLH121 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT23]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.