CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13089	Soybean	nucleus	78.09	78.65
KRH24147	Soybean	nucleus	68.2	70.18
Bra011658.1-P	Field mustard	cytosol	17.31	58.33
VIT_03s0038g01790.t01	Wine grape	nucleus	60.78	52.28
Solyc01g111130.2.1	Tomato	nucleus	57.95	49.25
PGSC0003DMT400004039	Potato	nucleus	57.95	49.1
EES03283	Sorghum	nucleus	49.12	43.99
KRH49674	Soybean	nucleus, plastid	50.18	43.16
Zm00001d044216_P002	Maize	nucleus, plastid	48.06	43.04
CDX72574	Canola	nucleus	37.1	42.86
TraesCS6B01G220300.1	Wheat	nucleus	44.52	42.28
Bra017745.1-P	Field mustard	nucleus	36.04	41.63
CDY47051	Canola	nucleus	35.34	40.82
TraesCS6A01G204300.1	Wheat	nucleus	45.94	40.25
TraesCS6D01G185100.1	Wheat	cytosol	45.94	40.25
Os02t0433600-01	Rice	nucleus	48.06	39.65
CDY68426	Canola	nucleus	33.57	37.4
KRH10681	Soybean	nucleus	12.01	37.36
KRH21650	Soybean	cytosol, nucleus, plastid	17.67	34.72
AT4G36060.3	Thale cress	nucleus, plastid	33.57	33.1
KRH22229	Soybean	nucleus	24.38	29.49
KRH27110	Soybean	nucleus	24.03	29.18
KRH55616	Soybean	cytosol, nucleus, plastid	24.03	28.81
KRH25888	Soybean	cytosol, nucleus, plastid	23.32	27.97
KRH10685	Soybean	nucleus	20.49	27.36
KRH31712	Soybean	cytosol, mitochondrion, nucleus	20.49	26.61
KRG90395	Soybean	cytosol, mitochondrion, nucleus	20.14	25.91
KRH22510	Soybean	nucleus	18.73	22.94
KRH26841	Soybean	nucleus	17.31	21.88

Protein Annotations

EntrezGene:100804250	MapMan:15.5.32	MapMan:25.4.1.4	Gene3D:4.10.280.10	EMBL:ACUP02004857	ncoils:Coil
EnsemblPlantsGene:GLYMA_08G148500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
UniProt:I1KTH1	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KRH43415	ProteinID:KRH43415	ProteinID:KRH43415.1
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR23042	PANTHER:PTHR23042:SF59	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI00023C68C9	InterPro:bHLH_dom	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:11362588..11364649

Molecular Weight (calculated)

32009.9 Da

IEP (calculated)

7.404

GRAVY (calculated)

-0.729

Length

283 amino acids

Sequence
(BLAST)

001: MDCSAARKTQ KADREKLRRD RLNEQFVELG NILDPDRPKN DKATIIGDTI QLLKDLTSQV SKLKDEYATL NEESRELTQE KNDLREEKAS LKSDIGNLNN
101: QYQQQLRTMF PWTAMDHSVM MAPPSYPYPV PMAVPPGPIP MQPYPFFANQ HPAVISNPCS TYVPYLAPNT IVEQQSTQYV SPPLHPCGRS NVSGKQESKS
201: KSSRESKAEK NEDSNDVTTD LELKTPGSSA DQVSVVFQGY PMIEDALDSS CVCLWFAGFI IQTKKIQQVV KEGKQLHRRK FIR

Best Arabidopsis Sequence Match ( AT3G19860.3 )
(BLAST)

001: MVELDTKICL RVGLQYDLLS LFDVLVAEEE VMDVSARKSQ KAGREKLRRE KLNEHFVELG NVLDPERPKN DKATILTDTV QLLKELTSEV NKLKSEYTAL
101: TDESRELTQE KNDLREEKTS LKSDIENLNL QYQQRLRSMS PWGAAMDHTV MMAPPPSFPY PMPIAMPPGS IPMHPSMPSY TYFGNQNPSM IPAPCPTYMP
201: YMPPNTVVEQ QSVHIPQNPG NRSREPRAKV SRESRSEKAE DSNEVATQLE LKTPGSTSDK DTLQRPEKTK RCKRNNNNNS IEESSHSSKC SSSPSVRDHS
301: SSSSVAGGQK PDDAK

Arabidopsis Description

BHLH121Transcription factor bHLH121 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT23]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.