Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26841 | Soybean | nucleus | 91.77 | 94.64 |
| KRH21650 | Soybean | cytosol, nucleus, plastid | 37.66 | 60.42 |
| VIT_12s0059g02650.t01 | Wine grape | nucleus | 62.34 | 60.0 |
| KRH55616 | Soybean | cytosol, nucleus, plastid | 58.87 | 57.63 |
| KRH10685 | Soybean | nucleus | 51.95 | 56.6 |
| KRH22229 | Soybean | nucleus | 56.71 | 55.98 |
| KRH25888 | Soybean | cytosol, nucleus, plastid | 57.14 | 55.93 |
| KRH27110 | Soybean | nucleus | 56.28 | 55.79 |
| KRH10681 | Soybean | nucleus | 21.64 | 54.95 |
| PGSC0003DMT400067294 | Potato | nucleus | 55.41 | 52.46 |
| Solyc07g052670.2.1 | Tomato | nucleus | 54.55 | 51.64 |
| KRG90395 | Soybean | cytosol, mitochondrion, nucleus | 40.69 | 42.73 |
| KRH31712 | Soybean | cytosol, mitochondrion, nucleus | 38.96 | 41.28 |
| KRH24147 | Soybean | nucleus | 24.24 | 20.36 |
| KRH43415 | Soybean | nucleus | 22.94 | 18.73 |
| KRH13089 | Soybean | nucleus | 22.51 | 18.51 |
| KRH49674 | Soybean | nucleus, plastid | 24.24 | 17.02 |
Protein Annotations
| EntrezGene:100803143 | MapMan:15.5.32 | MapMan:25.4.1.2 | Gene3D:4.10.280.10 | EMBL:ACUP02008417 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_13G305500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1M411 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH22510 | ProteinID:KRH22510 | ProteinID:KRH22510.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF78 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000233BDC1 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:40218499..40220682
Molecular Weight (calculated)
25843.7 Da
IEP (calculated)
8.203
GRAVY (calculated)
-0.700
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVNSSGGAS DWLYDYGFDI PVAGSDFMAS DSGGFRWGPQ SHNFKGPSNM SLEMEYSLDS TVMENGPSKR LRTESCASGS KACREKLRRD KLNERFLELS
101: SILEPSRQPK SDKVAILSDA ARVVIQLRNE AKRLKEMNDE LQAKVKELKG EKNELRDEKN RLKEEKEKLE QQVKVANIQP SFLPQAPDAK GQVGSHKLIP
201: FIGYPGIAMW QFMSPAAVDT SKDHLLRPPV A
101: SILEPSRQPK SDKVAILSDA ARVVIQLRNE AKRLKEMNDE LQAKVKELKG EKNELRDEKN RLKEEKEKLE QQVKVANIQP SFLPQAPDAK GQVGSHKLIP
201: FIGYPGIAMW QFMSPAAVDT SKDHLLRPPV A
001: MVSPENTNWL SDYPLIEGAF SDQNPTFPWQ IDGSATVSVE VDGFLCDADV IKEPSSRKRI KTESCTGSNS KACREKQRRD RLNDKFTELS SVLEPGRTPK
101: TDKVAIINDA IRMVNQARDE AQKLKDLNSS LQEKIKELKD EKNELRDEKQ KLKVEKERID QQLKAIKTQP QPQPCFLPNP QTLSQAQAPG SKLVPFTTYP
201: GFAMWQFMPP AAVDTSQDHV LRPPVA
101: TDKVAIINDA IRMVNQARDE AQKLKDLNSS LQEKIKELKD EKNELRDEKQ KLKVEKERID QQLKAIKTQP QPQPCFLPNP QTLSQAQAPG SKLVPFTTYP
201: GFAMWQFMPP AAVDTSQDHV LRPPVA
Arabidopsis Description
bHLH115Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I7Z3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.