Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10681 | Soybean | nucleus | 38.68 | 90.11 |
| KRH21650 | Soybean | cytosol, nucleus, plastid | 58.02 | 85.42 |
| KRH22229 | Soybean | nucleus | 62.26 | 56.41 |
| KRH55616 | Soybean | cytosol, nucleus, plastid | 62.74 | 56.36 |
| KRH25888 | Soybean | cytosol, nucleus, plastid | 61.79 | 55.51 |
| KRH27110 | Soybean | nucleus | 60.85 | 55.36 |
| Solyc02g079970.2.1 | Tomato | nucleus | 59.91 | 55.22 |
| PGSC0003DMT400055907 | Potato | nucleus | 59.91 | 55.22 |
| VIT_00s0532g00050.t01 | Wine grape | nucleus | 68.4 | 55.13 |
| KRH22510 | Soybean | nucleus | 56.6 | 51.95 |
| KRH26841 | Soybean | nucleus | 54.72 | 51.79 |
| KRG90395 | Soybean | cytosol, mitochondrion, nucleus | 44.81 | 43.18 |
| KRH31712 | Soybean | cytosol, mitochondrion, nucleus | 43.4 | 42.2 |
| KRH24147 | Soybean | nucleus | 28.3 | 21.82 |
| KRH13089 | Soybean | nucleus | 27.36 | 20.64 |
| KRH43415 | Soybean | nucleus | 27.36 | 20.49 |
| KRH49674 | Soybean | nucleus, plastid | 29.72 | 19.15 |
Protein Annotations
| EntrezGene:100790993 | MapMan:15.5.32 | MapMan:25.4.1.2 | Gene3D:4.10.280.10 | EMBL:ACUP02009152 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_15G063000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1ME58 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH10685 | ProteinID:KRH10685 | ProteinID:KRH10685.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF78 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000233B766 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:4825805..4829074
Molecular Weight (calculated)
24053.7 Da
IEP (calculated)
8.439
GRAVY (calculated)
-0.642
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNSNWVLDY DYLDNIPLTT LEPPNFSWSS SSPPPTLSVE LDDSFGILDG LKENRSRKRL RPSDSKACRE KMRRDRLNDR FMELGSILDP RKPLKMDKAV
101: ILSDAVRVVS QLREEAQKLR ESTENLQEKI NALKDEKNEL RDEKQRLKVE KENLEQKVKA LSSQPSFLAA AGQVVGSKLV PFMGYPGVAM WQFLSPAAVD
201: TSQDHVLRPP VA
101: ILSDAVRVVS QLREEAQKLR ESTENLQEKI NALKDEKNEL RDEKQRLKVE KENLEQKVKA LSSQPSFLAA AGQVVGSKLV PFMGYPGVAM WQFLSPAAVD
201: TSQDHVLRPP VA
001: MVSPENTNWL SDYPLIEGAF SDQNPTFPWQ IDGSATVSVE VDGFLCDADV IKEPSSRKRI KTESCTGSNS KACREKQRRD RLNDKFTELS SVLEPGRTPK
101: TDKVAIINDA IRMVNQARDE AQKLKDLNSS LQEKIKELKD EKNELRDEKQ KLKVEKERID QQLKAIKTQP QPQPCFLPNP QTLSQAQAPG SKLVPFTTYP
201: GFAMWQFMPP AAVDTSQDHV LRPPVA
101: TDKVAIINDA IRMVNQARDE AQKLKDLNSS LQEKIKELKD EKNELRDEKQ KLKVEKERID QQLKAIKTQP QPQPCFLPNP QTLSQAQAPG SKLVPFTTYP
201: GFAMWQFMPP AAVDTSQDHV LRPPVA
Arabidopsis Description
bHLH115Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I7Z3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.