Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21650 | Soybean | cytosol, nucleus, plastid | 40.68 | 74.31 |
| KRH10681 | Soybean | nucleus | 23.95 | 69.23 |
| KRH10685 | Soybean | nucleus | 55.13 | 68.4 |
| VIT_12s0059g02650.t01 | Wine grape | nucleus | 60.08 | 65.83 |
| VIT_19s0014g05100.t01 | Wine grape | nucleus | 58.17 | 64.56 |
| Solyc02g079970.2.1 | Tomato | nucleus | 54.37 | 62.17 |
| PGSC0003DMT400055907 | Potato | nucleus | 53.99 | 61.74 |
| VIT_05s0049g00460.t01 | Wine grape | cytosol, nucleus, plasma membrane | 39.16 | 47.47 |
| VIT_14s0081g00720.t01 | Wine grape | nucleus | 38.02 | 46.3 |
| VIT_04s0023g03430.t01 | Wine grape | nucleus | 28.9 | 23.31 |
| VIT_03s0038g01790.t01 | Wine grape | nucleus | 28.52 | 22.8 |
Protein Annotations
| EntrezGene:100245935 | wikigene:100245935 | MapMan:15.5.32 | MapMan:25.4.1.2 | Gene3D:4.10.280.10 | ProteinID:CCB57412 |
| ProteinID:CCB57412.1 | ncoils:Coil | UniProt:F6HRV4 | EMBL:FN596044 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EntrezGene:LOC100245935 |
| wikigene:LOC100245935 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF102 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI00021082DD | ArrayExpress:VIT_00s0532g00050 | EnsemblPlantsGene:VIT_00s0532g00050 | EnsemblPlants:VIT_00s0532g00050.t01 | RefSeq:XP_002273184 |
| RefSeq:XP_002273184.2 | InterPro:bHLH_dom | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:31431328..31437392
Molecular Weight (calculated)
29476.3 Da
IEP (calculated)
5.727
GRAVY (calculated)
-0.459
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSPEEDPNW IFDYGLIDDV PVPSLQATFN WPSHDFTASA ALGLMCFLII FLSVEFDDSP VNLDDVKENH SRKSVEFDDS PVNLDDVKEN HSRKRMRSGL
101: CSASGSKACR EKVRRDRLND RFLELGSILE PGRPPKMDKA VILSDALRMM TQLRSEGQKL KKSCEDLQEK INELKAEKNE LRDEKQRLKT EKENIVQQIK
201: ALSSQAGFLP HPSAIPAPFA APGQVVGSKL MPFIGYPGVS MWQFMPPAAV DTSQDHVLRP PVA
101: CSASGSKACR EKVRRDRLND RFLELGSILE PGRPPKMDKA VILSDALRMM TQLRSEGQKL KKSCEDLQEK INELKAEKNE LRDEKQRLKT EKENIVQQIK
201: ALSSQAGFLP HPSAIPAPFA APGQVVGSKL MPFIGYPGVS MWQFMPPAAV DTSQDHVLRP PVA
001: MVSPENANWI CDLIDADYGS FTIQGPGFSW PVQQPIGVSS NSSAGVDGSA GNSEASKEPG SKKRGRCESS SATSSKACRE KQRRDRLNDK FMELGAILEP
101: GNPPKTDKAA ILVDAVRMVT QLRGEAQKLK DSNSSLQDKI KELKTEKNEL RDEKQRLKTE KEKLEQQLKA MNAPQPSFFP APPMMPTAFA SAQGQAPGNK
201: MVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA
101: GNPPKTDKAA ILVDAVRMVT QLRGEAQKLK DSNSSLQDKI KELKTEKNEL RDEKQRLKTE KEKLEQQLKA MNAPQPSFFP APPMMPTAFA SAQGQAPGNK
201: MVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA
Arabidopsis Description
ILR3Transcription factor ILR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH37]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.