Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH49674 | Soybean | nucleus, plastid | 62.27 | 61.7 |
| VIT_03s0038g01790.t01 | Wine grape | nucleus | 60.12 | 59.57 |
| VIT_12s0059g02650.t01 | Wine grape | nucleus | 23.62 | 32.08 |
| VIT_19s0014g05100.t01 | Wine grape | nucleus | 22.39 | 30.8 |
| VIT_14s0081g00720.t01 | Wine grape | nucleus | 19.63 | 29.63 |
| VIT_00s0532g00050.t01 | Wine grape | nucleus | 23.31 | 28.9 |
| VIT_05s0049g00460.t01 | Wine grape | cytosol, nucleus, plasma membrane | 19.02 | 28.57 |
Protein Annotations
| EntrezGene:100259173 | wikigene:100259173 | MapMan:15.5.32 | MapMan:25.4.1.4 | Gene3D:4.10.280.10 | EMBL:AM443708 |
| ProteinID:CAN69588 | ProteinID:CAN69588.1 | ProteinID:CBI17374 | ProteinID:CBI17374.3 | ncoils:Coil | UniProt:D7SNZ5 |
| EMBL:FN594959 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | EntrezGene:LOC100259173 | wikigene:LOC100259173 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR23042 | PANTHER:PTHR23042:SF73 | SMART:SM00353 | SUPFAM:SSF47459 | TIGR:TC69929 | UniParc:UPI0001BE11C8 |
| ArrayExpress:VIT_04s0023g03430 | EnsemblPlantsGene:VIT_04s0023g03430 | EnsemblPlants:VIT_04s0023g03430.t01 | unigene:Vvi.23613 | RefSeq:XP_002265960 | RefSeq:XP_002265960.1 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:20011682..20015276
Molecular Weight (calculated)
35995.8 Da
IEP (calculated)
5.323
GRAVY (calculated)
-0.906
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQWKADDFT QSVAPELAPS NPLSLPSSNN RLPEARQRTE VEAKDSIAAR KVQKADREKL RRDRLNEHFL ELGNTLDPDR PKNDKATILA DTIQMLKDLT
101: AEVNRLKVEC AALSEESREL VQEKNELREE KVALKSDIDN LNVQYQQRLR VMFPWAPIDP SVVMGPSPYS YPVPVPVPSG PIPMHPSLQP FPFFGNQNPS
201: GIPNPCSTFI PYQTPANPPT EVPSAQYASA SHVSSKPDSK SKSSDRERSS NTEKCDESND VATDLELKTP GSSSQQDLLT GEKKGKQSQR KERSATDGSC
301: SSKYSSSQAL QDSSSNSVGD LPKSDK
101: AEVNRLKVEC AALSEESREL VQEKNELREE KVALKSDIDN LNVQYQQRLR VMFPWAPIDP SVVMGPSPYS YPVPVPVPSG PIPMHPSLQP FPFFGNQNPS
201: GIPNPCSTFI PYQTPANPPT EVPSAQYASA SHVSSKPDSK SKSSDRERSS NTEKCDESND VATDLELKTP GSSSQQDLLT GEKKGKQSQR KERSATDGSC
301: SSKYSSSQAL QDSSSNSVGD LPKSDK
001: MDVSARKSQK AGREKLRREK LNEHFVELGN VLDPERPKND KATILTDTVQ LLKELTSEVN KLKSEYTALT DESRELTQEK NDLREEKTSL KSDIENLNLQ
101: YQQRLRSMSP WGAAMDHTVM MAPPPSFPYP MPIAMPPGSI PMHPSMPSYT YFGNQNPSMI PAPCPTYMPY MPPNTVVEQQ SVHIPQNPGN RSREPRAKVS
201: RESRSEKAED SNEVATQLEL KTPGSTSDKD TLQRPEKTKR CKRNNNNNSI EESSHSSKCS SSPSVRDHSS SSSVAGGQKP DDAK
101: YQQRLRSMSP WGAAMDHTVM MAPPPSFPYP MPIAMPPGSI PMHPSMPSYT YFGNQNPSMI PAPCPTYMPY MPPNTVVEQQ SVHIPQNPGN RSREPRAKVS
201: RESRSEKAED SNEVATQLEL KTPGSTSDKD TLQRPEKTKR CKRNNNNNSI EESSHSSKCS SSPSVRDHSS SSSVAGGQKP DDAK
Arabidopsis Description
BHLH121Transcription factor bHLH121 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT23]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.