Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
20363867
plastid: 26371478 |
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031071 | Potato | cytosol | 99.08 | 99.08 |
| KRH01822 | Soybean | cytosol | 85.71 | 84.93 |
| KRH46865 | Soybean | endoplasmic reticulum | 85.71 | 84.93 |
| Solyc09g097900.2.1 | Tomato | cytosol | 84.33 | 84.72 |
| Solyc09g056340.2.1 | Tomato | cytosol | 77.42 | 80.0 |
| Solyc05g054150.2.1 | Tomato | cytosol | 63.59 | 61.06 |
| Solyc10g050030.1.1 | Tomato | cytosol | 20.28 | 55.7 |
| Solyc11g012460.1.1 | Tomato | plastid | 62.21 | 48.91 |
| Solyc03g118820.2.1 | Tomato | plastid | 49.31 | 44.21 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | UniProt:K4CWY7 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF884 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | EnsemblPlantsGene:Solyc09g098170.2 |
| EnsemblPlants:Solyc09g098170.2.1 | TIGRFAMs:TIGR00231 | UniParc:UPI000276C162 | : | : | : |
Description
No Description!
Coordinates
chr9:+:72044889..72048527
Molecular Weight (calculated)
24286.4 Da
IEP (calculated)
4.878
GRAVY (calculated)
-0.410
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSDDEGEE YLFKIVIIGD SAVGKSNLLT RYARNEFNLH SKATIGVEFQ TQTLEIDGKE VKAQIWDTAG QERFRAVTSA YYRGAFGALV VYDISRRTTF
101: DSIPRWLDEL KTHSDTTVAR ILVGNKCDLE NIRAVSVEEG KSLAESEGMF FMETSALDST NVNKAFEIVI REIYNSVSRK VLNSDSYKAE LSVNRVNLVN
201: DGTDGSKQKQ GYSCCSR
101: DSIPRWLDEL KTHSDTTVAR ILVGNKCDLE NIRAVSVEEG KSLAESEGMF FMETSALDST NVNKAFEIVI REIYNSVSRK VLNSDSYKAE LSVNRVNLVN
201: DGTDGSKQKQ GYSCCSR
001: MRSMSSCASL LHRLPSPPLS LSLSLQTSPT SLSRNLGKKK KTVKRAMSSD DEGREEYLFK IVVIGDSAVG KSNLLSRYAR NEFSANSKAT IGVEFQTQSM
101: EIEGKEVKAQ IWDTAGQERF RAVTSAYYRG AVGALVVYDI TRRTTFESVG RWLDELKIHS DTTVARMLVG NKCDLENIRA VSVEEGKALA EEEGLFFVET
201: SALDSTNVKT AFEMVILDIY NNVSRKQLNS DTYKDELTVN RVSLVKDDNS ASKQSSGFSC CSST
101: EIEGKEVKAQ IWDTAGQERF RAVTSAYYRG AVGALVVYDI TRRTTFESVG RWLDELKIHS DTTVARMLVG NKCDLENIRA VSVEEGKALA EEEGLFFVET
201: SALDSTNVKT AFEMVILDIY NNVSRKQLNS DTYKDELTVN RVSLVKDDNS ASKQSSGFSC CSST
Arabidopsis Description
ARARAB GTPase homolog A5E [Source:TAIR;Acc:AT1G05810]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.