Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46865 | Soybean | endoplasmic reticulum | 97.72 | 97.72 |
| KRH55234 | Soybean | cytosol | 32.42 | 91.03 |
| PGSC0003DMT400031071 | Potato | cytosol | 84.93 | 85.71 |
| Solyc09g098170.2.1 | Tomato | plastid | 84.93 | 85.71 |
| KRH46603 | Soybean | cytosol | 79.91 | 82.16 |
| KRH34233 | Soybean | cytosol | 63.93 | 62.78 |
| KRG92561 | Soybean | cytosol | 63.93 | 61.95 |
| KRH48616 | Soybean | cytosol | 19.63 | 58.11 |
| KRG93819 | Soybean | cytosol | 21.92 | 50.53 |
| KRH39102 | Soybean | cytosol | 41.1 | 50.0 |
| KRH41826 | Soybean | cytosol | 49.77 | 50.0 |
| KRH60507 | Soybean | cytosol | 48.4 | 48.85 |
| KRH48618 | Soybean | cytosol | 28.77 | 44.06 |
Protein Annotations
| EntrezGene:100776146 | MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EMBL:ACUP02011534 | EnsemblPlantsGene:GLYMA_18G300600 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 |
| UniProt:I1N5F7 | EnsemblPlants:KRH01822 | ProteinID:KRH01822 | ProteinID:KRH01822.1 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF884 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI000233F423 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:57844897..57846271
Molecular Weight (calculated)
24386.8 Da
IEP (calculated)
4.986
GRAVY (calculated)
-0.279
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSEDEGGE EYLFKIVIIG DSAVGKSNLL SRYARNEFNM HSKATIGVEF QTQCLEIDSK EVKAQIWDTA GQERFRAVTS AYYRGAVGAL IVYDISRRTT
101: FDSVGRWLDE LKTHCDTTVA MMLVGNKCDL ENIRAVSVDE GKSLAEAEGL FFMETSALDS TNVKTAFEMV IREIYTNVSR KVLNSETYKA ELSVNRVSLV
201: NNGASTSKQN QPYFSCCSR
101: FDSVGRWLDE LKTHCDTTVA MMLVGNKCDL ENIRAVSVDE GKSLAEAEGL FFMETSALDS TNVKTAFEMV IREIYTNVSR KVLNSETYKA ELSVNRVSLV
201: NNGASTSKQN QPYFSCCSR
001: MSSDDEGGEE YLFKIVIIGD SAVGKSNLLS RYARNEFNAH SKATIGVEFQ TQNMEIEGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDISRRSTF
101: ESVGRWLDEL KTHSDTTVAR MLVGNKCDLE SIRAVSVEEG KALAETEGLF FMETSALDST NVKTAFEMVI RDIYTNISRK QLNSDTYKTE LSMKNRVSLV
201: KDDNKSSTQG FGFSCCSSS
101: ESVGRWLDEL KTHSDTTVAR MLVGNKCDLE SIRAVSVEEG KALAETEGLF FMETSALDST NVKTAFEMVI RDIYTNISRK QLNSDTYKTE LSMKNRVSLV
201: KDDNKSSTQG FGFSCCSSS
Arabidopsis Description
RABA5DRas-related protein RABA5d [Source:UniProtKB/Swiss-Prot;Acc:Q9SIP0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.