Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 4
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g01620.t01 | Wine grape | cytosol | 61.05 | 66.67 |
| KRH48616 | Soybean | cytosol | 46.32 | 59.46 |
| Zm00001d005612_P001 | Maize | cytosol | 58.95 | 50.45 |
| OQU87831 | Sorghum | cytosol | 48.42 | 45.54 |
| OQU77614 | Sorghum | cytosol | 46.32 | 42.31 |
| GSMUA_Achr7P23610_001 | Banana | cytosol | 54.74 | 29.38 |
| CDY39445 | Canola | cytosol | 66.32 | 29.17 |
| CDX77609 | Canola | cytosol, plasma membrane | 66.32 | 29.17 |
| Bra025060.1-P | Field mustard | cytosol | 66.32 | 29.17 |
| Bra012576.1-P | Field mustard | cytosol | 65.26 | 28.84 |
| Zm00001d020102_P001 | Maize | cytosol | 57.89 | 27.36 |
| CDY51631 | Canola | cytosol | 28.42 | 26.73 |
| KRH41826 | Soybean | cytosol | 52.63 | 22.94 |
| Os01t0667600-01 | Rice | cytosol, golgi, plasma membrane, plastid | 53.68 | 22.77 |
| KRH60507 | Soybean | cytosol | 51.58 | 22.58 |
| KRH46603 | Soybean | cytosol | 50.53 | 22.54 |
| KRH34233 | Soybean | cytosol | 51.58 | 21.97 |
| KRH46865 | Soybean | endoplasmic reticulum | 50.53 | 21.92 |
| KRH01822 | Soybean | cytosol | 50.53 | 21.92 |
| KRG92561 | Soybean | cytosol | 51.58 | 21.68 |
| KRH39102 | Soybean | cytosol | 37.89 | 20.0 |
| Zm00001d032569_P001 | Maize | plastid | 34.74 | 19.64 |
| KRH55234 | Soybean | cytosol | 3.16 | 3.85 |
| KRH48618 | Soybean | cytosol | 4.21 | 2.8 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EMBL:ACUP02011630 | EnsemblPlantsGene:GLYMA_19G043600 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | UniProt:K7MWG4 |
| EnsemblPlants:KRG93819 | ProteinID:KRG93819 | ProteinID:KRG93819.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF544 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000295CE51 | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:6402604..6404354
Molecular Weight (calculated)
10784.8 Da
IEP (calculated)
8.219
GRAVY (calculated)
-0.267
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: MLGYKGDDEY DYLFKLVLIS DSGVGKSNLL SHFTRNEFNL ESKSTIGVEF RKKSLNINAK VIKAQIWDTA GQESFPCLLN FSHNSLFLGT YTCKH
001: MAGYRADDDY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSLNVNEK VIKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHST
101: FENVERWLRE LRDHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAENESL YFMETSALES TNVENAFSEV LTQIYHVVSK KAMEAGEDSG NVPSKGEKID
201: VDVSAVKKTG CCSN
101: FENVERWLRE LRDHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAENESL YFMETSALES TNVENAFSEV LTQIYHVVSK KAMEAGEDSG NVPSKGEKID
201: VDVSAVKKTG CCSN
Arabidopsis Description
RABA1DRABA1d [Source:UniProtKB/TrEMBL;Acc:A0A178V3A0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.