CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g01620.t01	Wine grape	cytosol	32.67	37.93
OQU87831	Sorghum	cytosol	31.68	31.68
Zm00001d005612_P001	Maize	cytosol	34.65	31.53
KRG93819	Soybean	cytosol	26.73	28.42
Bra012576.1-P	Field mustard	cytosol	60.4	28.37
CDY39445	Canola	cytosol	60.4	28.24
CDX77609	Canola	cytosol, plasma membrane	60.4	28.24
OQU77614	Sorghum	cytosol	27.72	26.92
CDY54837	Canola	cytosol	16.83	26.56
Os01t0667600-01	Rice	cytosol, golgi, plasma membrane, plastid	57.43	25.89
GSMUA_Achr7P23610_001	Banana	cytosol	42.57	24.29
CDX83007	Canola	cytosol	26.73	24.11
CDX83500	Canola	cytosol	47.52	22.54
CDY70114	Canola	cytosol	47.52	22.54
CDY17945	Canola	cytosol	47.52	22.54
CDY42801	Canola	cytosol	47.52	22.54
CDY25963	Canola	cytosol	46.53	21.46
CDX72997	Canola	cytosol	48.51	21.3
CDY40561	Canola	cytosol	46.53	21.27
CDY28925	Canola	cytosol	46.53	21.27
CDY17729	Canola	cytosol	46.53	21.27
CDX77774	Canola	cytosol	46.53	21.27
CDY41053	Canola	cytosol	46.53	21.17
CDX84764	Canola	cytosol	43.56	20.09
CDX79430	Canola	cytosol	43.56	20.09
CDX96853	Canola	mitochondrion	29.7	20.0
CDX96730	Canola	cytosol	44.55	19.91
CDX83861	Canola	cytosol	44.55	19.91
CDY06181	Canola	cytosol	47.52	19.75
CDY55745	Canola	cytosol	42.57	19.63
CDY10008	Canola	mitochondrion	47.52	18.32
Zm00001d020102_P001	Maize	cytosol	35.64	17.91
Zm00001d032569_P001	Maize	plastid	17.82	10.71
CDY65720	Canola	extracellular	3.96	3.08

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078INV2	UniProt:A0A078INV2	EnsemblPlants:CDY51631	ProteinID:CDY51631
ProteinID:CDY51631.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00003874001	InterPro:P-loop_NTPase	PFAM:PF00071	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF649	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI0004EDF80A
SEG:seg	:	:	:	:	:

Description

BnaCnng21230DBnaCnng21230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INV2]

Coordinates

chrLK033014:+:46111..46435

Molecular Weight (calculated)

11449.4 Da

IEP (calculated)

5.049

GRAVY (calculated)

-0.156

Length

101 amino acids

Sequence
(BLAST)

001: MCVSSSSSLF ARYALNLYKE SFSNQRASTM AAYRADDDYD YLFKVVLIGD SGVVDDKIVK AQIWDTASQE SAYYRGAVGA LLVYDVTRHV TFENVERWLK
101: P

Best Arabidopsis Sequence Match ( AT5G60860.1 )
(BLAST)

001: MAAYRADDEY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN

Arabidopsis Description

RABA1FRas-related protein RABA1f [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.