Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g01620.t01 | Wine grape | cytosol | 59.41 | 68.97 |
| OQU77614 | Sorghum | cytosol | 68.32 | 66.35 |
| Zm00001d005612_P001 | Maize | cytosol | 59.41 | 54.05 |
| KRG93819 | Soybean | cytosol | 45.54 | 48.42 |
| CDY51631 | Canola | cytosol | 31.68 | 31.68 |
| Bra012576.1-P | Field mustard | cytosol | 63.37 | 29.77 |
| Bra025060.1-P | Field mustard | cytosol | 63.37 | 29.63 |
| CDX77609 | Canola | cytosol, plasma membrane | 63.37 | 29.63 |
| CDY39445 | Canola | cytosol | 63.37 | 29.63 |
| GSMUA_Achr7P23610_001 | Banana | cytosol | 51.49 | 29.38 |
| Zm00001d020102_P001 | Maize | cytosol | 57.43 | 28.86 |
| Os01t0667600-01 | Rice | cytosol, golgi, plasma membrane, plastid | 59.41 | 26.79 |
| OQU80857 | Sorghum | cytosol | 50.49 | 23.61 |
| EER97606 | Sorghum | cytosol | 49.51 | 22.52 |
| Zm00001d032569_P001 | Maize | plastid | 35.64 | 21.43 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1W0W0D8 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlants:OQU87831 | ProteinID:OQU87831 |
| ProteinID:OQU87831.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF592 | SMART:SM00175 | EnsemblPlantsGene:SORBI_3003G351150 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI0009DC893E | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:67066558..67066868
Molecular Weight (calculated)
11246.2 Da
IEP (calculated)
6.816
GRAVY (calculated)
-0.385
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGYRAEDD YDYLFKVVLT ATPASSNLLS RFTRNEFSFE SKSTIGVEFA TRSLQVDGKV VKAQIWDTAG QERYVSFQLV PAPLPPPPTR QTGGRSDLRL
101: D
101: D
001: MAGYRVEDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATRTLKVDGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRRAT
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN
Arabidopsis Description
RABA1BRABA1b [Source:UniProtKB/TrEMBL;Acc:A0A178WJV5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.