CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G152600.1	Wheat	cytosol	94.91	94.47
TraesCS7A01G256000.1	Wheat	cytosol	94.91	94.47
Os08t0525000-01	Rice	plasma membrane	94.44	94.44
TraesCS7D01G254400.1	Wheat	cytosol	94.44	94.01
HORVU7Hr1G052840.3	Barley	cytosol	94.44	93.15
Zm00001d031562_P001	Maize	cytosol	50.93	88.71
GSMUA_Achr11P...	Banana	cytosol	80.09	80.09
GSMUA_Achr11P...	Banana	cytosol	79.17	78.8
Solyc09g097900.2.1	Tomato	cytosol	78.7	78.7
PGSC0003DMT400042789	Potato	cytosol	78.7	78.7
AT2G43130.1	Thale cress	cytosol	76.39	77.1
Bra000290.1-P	Field mustard	cytosol	75.93	77.0
CDX83500	Canola	cytosol	75.93	77.0
CDY42801	Canola	cytosol	75.93	77.0
AT2G31680.1	Thale cress	cytosol	76.85	75.8
Bra032453.1-P	Field mustard	cytosol	76.39	75.69
CDY17945	Canola	cytosol	74.54	75.59
CDX79430	Canola	cytosol	76.39	75.34
CDX84764	Canola	cytosol	75.93	74.89
Bra022861.1-P	Field mustard	cytosol	75.46	74.77
CDY70114	Canola	cytosol	73.61	74.65
Bra004747.1-P	Field mustard	cytosol	73.61	74.65
CDY55745	Canola	cytosol	74.07	73.06
Bra005650.1-P	Field mustard	cytosol	74.07	73.06
CDY06181	Canola	cytosol	76.39	67.9
CDY10008	Canola	mitochondrion	76.39	62.98
AT1G05810.2	Thale cress	plastid	75.93	62.12
EER97606	Sorghum	cytosol	63.43	61.71
KRH55234	Soybean	cytosol	22.22	61.54
OQU87831	Sorghum	cytosol	23.61	50.49
OQU77614	Sorghum	cytosol	21.76	45.19

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EntrezGene:8062413	UniProt:A0A1Z5RAX1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlants:OQU80857
ProteinID:OQU80857	ProteinID:OQU80857.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF884	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
EnsemblPlantsGene:SORBI_3007G197600	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0001A87DB5
RefSeq:XP_002444720.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:62906394..62909089

Molecular Weight (calculated)

24072.2 Da

IEP (calculated)

4.698

GRAVY (calculated)

-0.376

Length

216 amino acids

Sequence
(BLAST)

001: MGDESDGEAE EYLFKVVIIG DSAVGKSNLL SRYARNEFSL HSKATIGVEF QTQSMDIDGK EVKAQIWDTA GQERFRAVTS AYYRGAFGAL LVYDISRRST
101: FDNVGRWLQE LNTHSDTTVA KMLVGNKCDL DNIREVPVEE GKALAEAEGL FFMETSALDA TNVRTAFEIV IREIYSSVSR KILNSDSYKA ELSLNRVSID
201: GDSKDDKKQT SRFGCC

Best Arabidopsis Sequence Match ( AT2G43130.1 )
(BLAST)

001: MSDDDERGEE YLFKIVIIGD SAVGKSNLLT RYARNEFNPN SKATIGVEFQ TQSMLIDGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDITRSSTF
101: ENVGRWLDEL NTHSDTTVAK MLIGNKCDLE SIRAVSVEEG KSLAESEGLF FMETSALDST NVKTAFEMVI REIYSNISRK QLNSDSYKEE LTVNRVSLVK
201: NENEGTKTFS CCSR

Arabidopsis Description

RABA5CRas-related protein RABA5c [Source:UniProtKB/Swiss-Prot;Acc:P28187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.