Factsheet for TraesCS7D01G254400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G256000.1	Wheat	cytosol	99.08	99.08
TraesCS7B01G152600.1	Wheat	cytosol	98.16	98.16
HORVU7Hr1G052840.3	Barley	cytosol	97.7	96.8
OQU80857	Sorghum	cytosol	94.01	94.44
Os08t0525000-01	Rice	plasma membrane	92.17	92.59
Zm00001d031562_P001	Maize	cytosol	50.23	87.9
GSMUA_Achr11P...	Banana	cytosol	79.72	80.09
GSMUA_Achr11P...	Banana	cytosol	78.34	78.34
AT2G43130.1	Thale cress	cytosol	76.96	78.04
CDY42801	Canola	cytosol	76.5	77.93
Bra000290.1-P	Field mustard	cytosol	76.5	77.93
CDX83500	Canola	cytosol	76.5	77.93
Solyc09g097900.2.1	Tomato	cytosol	77.42	77.78
PGSC0003DMT400042789	Potato	cytosol	77.42	77.78
AT2G31680.1	Thale cress	cytosol	78.34	77.63
CDY17945	Canola	cytosol	75.12	76.53
Bra032453.1-P	Field mustard	cytosol	76.04	75.69
CDY70114	Canola	cytosol	74.19	75.59
Bra004747.1-P	Field mustard	cytosol	74.19	75.59
CDX79430	Canola	cytosol	75.58	74.89
Bra005650.1-P	Field mustard	cytosol	75.58	74.89
CDY55745	Canola	cytosol	75.58	74.89
CDX84764	Canola	cytosol	75.12	74.43
Bra022861.1-P	Field mustard	cytosol	74.65	74.31
CDY06181	Canola	cytosol	76.04	67.9
AT1G05810.2	Thale cress	plastid	76.96	63.26
CDY10008	Canola	mitochondrion	76.04	62.98
KRH55234	Soybean	cytosol	22.58	62.82
TraesCS2D01G158800.1	Wheat	cytosol	63.13	61.44

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF884	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS7D01G254400
EnsemblPlants:TraesCS7D01G254400.1	TIGR:cd01868	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:231380884..231383233

Molecular Weight (calculated)

24132.1 Da

IEP (calculated)

4.543

GRAVY (calculated)

-0.406

Length

217 amino acids

Sequence
(BLAST)

001: MGDDSDGEAE EYLFKVVIIG DSAVGKSNLL SRYARNEFNL HSKATIGVEF QTQSMDIDGK EVKAQIWDTA GQERFRAVTS AYYRGAFGAL LVYDISRRGT
101: FDNVGRWLQE LNTHSDTTVA KMLVGNKCDL ENIREVPVEE GKALAESEGL FFMETSALDS TNVNTAFELV IKEIYSSVSR KILNSDTYKA ELSLNRVSID
201: DGDSKDSQKQ TSRFGCC

Best Arabidopsis Sequence Match ( AT2G43130.1 )
(BLAST)

001: MSDDDERGEE YLFKIVIIGD SAVGKSNLLT RYARNEFNPN SKATIGVEFQ TQSMLIDGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDITRSSTF
101: ENVGRWLDEL NTHSDTTVAK MLIGNKCDLE SIRAVSVEEG KSLAESEGLF FMETSALDST NVKTAFEMVI REIYSNISRK QLNSDSYKEE LTVNRVSLVK
201: NENEGTKTFS CCSR

Arabidopsis Description

RABA5CRas-related protein RABA5c [Source:UniProtKB/Swiss-Prot;Acc:P28187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.