Factsheet for Os08t0525000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80857	Sorghum	cytosol	94.44	94.44
TraesCS7B01G152600.1	Wheat	cytosol	93.06	92.63
TraesCS7A01G256000.1	Wheat	cytosol	93.06	92.63
TraesCS7D01G254400.1	Wheat	cytosol	92.59	92.17
HORVU7Hr1G052840.3	Barley	cytosol	92.59	91.32
Zm00001d031562_P001	Maize	cytosol	50.0	87.1
GSMUA_Achr11P...	Banana	cytosol	81.48	81.48
GSMUA_Achr11P...	Banana	cytosol	80.56	80.18
Solyc09g097900.2.1	Tomato	cytosol	80.09	80.09
PGSC0003DMT400042789	Potato	cytosol	80.09	80.09
AT2G43130.1	Thale cress	cytosol	76.39	77.1
Bra000290.1-P	Field mustard	cytosol	75.93	77.0
CDX83500	Canola	cytosol	75.93	77.0
CDY42801	Canola	cytosol	75.93	77.0
CDX79430	Canola	cytosol	77.78	76.71
AT2G31680.1	Thale cress	cytosol	77.31	76.26
CDX84764	Canola	cytosol	77.31	76.26
Bra022861.1-P	Field mustard	cytosol	76.85	76.15
CDY17945	Canola	cytosol	74.54	75.59
Bra032453.1-P	Field mustard	cytosol	75.93	75.23
CDY70114	Canola	cytosol	73.61	74.65
Bra004747.1-P	Field mustard	cytosol	73.61	74.65
CDY55745	Canola	cytosol	74.54	73.52
Bra005650.1-P	Field mustard	cytosol	74.54	73.52
CDY06181	Canola	cytosol	75.93	67.49
Os05t0280200-01	Rice	plasma membrane	30.56	64.71
KRH55234	Soybean	cytosol	22.69	62.82
CDY10008	Canola	mitochondrion	75.93	62.6
AT1G05810.2	Thale cress	plastid	75.93	62.12
Os07t0634200-01	Rice	plasma membrane	62.5	61.36
Os01t0667600-01	Rice	cytosol, golgi, plasma membrane, plastid	53.7	51.79

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EntrezGene:4346088	EMBL:AK103220	ProteinID:BAC75417.1	ProteinID:BAF24204.1
ProteinID:BAT06331.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	GO:GO:0030246	EnsemblPlantsGene:Os08g0525000	EnsemblPlants:Os08t0525000-01	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF884	UniProt:Q84QW0
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0000185CA2	RefSeq:XP_015648327.1	SEG:seg	:

Description

small GTP-binding protein OsRab11G2Ras GTPase family protein. (Os08t0525000-01)

Coordinates

chr8:-:26120601..26123497

Molecular Weight (calculated)

24170.3 Da

IEP (calculated)

4.692

GRAVY (calculated)

-0.433

Length

216 amino acids

Sequence
(BLAST)

001: MGDESEGETE EYLFKVVIIG DSAVGKSNLL SRYARNEFNL HSKATIGVEF QTQSMDINGK DVKAQIWDTA GQERFRAVTS AYYRGAFGAL LVYDISRRST
101: FDNVGRWLQE LNTHSDTTVA KMLVGNKCDL DNIREVPVEE GKALAEAEGL FFMETSALDS TNVRTAFEIV IKEIYSNVSR KILNSDSYKA ELSLNRVSIE
201: GDSKDDQKQS NRFGCC

Best Arabidopsis Sequence Match ( AT2G31680.1 )
(BLAST)

001: MSSDDEGGEE YLFKIVIIGD SAVGKSNLLS RYARNEFNAH SKATIGVEFQ TQNMEIEGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDISRRSTF
101: ESVGRWLDEL KTHSDTTVAR MLVGNKCDLE SIRAVSVEEG KALAETEGLF FMETSALDST NVKTAFEMVI RDIYTNISRK QLNSDTYKTE LSMKNRVSLV
201: KDDNKSSTQG FGFSCCSSS

Arabidopsis Description

RABA5DRas-related protein RABA5d [Source:UniProtKB/Swiss-Prot;Acc:Q9SIP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.