Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004747.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY17945 | Canola | cytosol | 98.59 | 98.59 |
| AT2G43130.1 | Thale cress | cytosol | 94.37 | 93.93 |
| CDY42801 | Canola | cytosol | 92.02 | 92.02 |
| CDX83500 | Canola | cytosol | 92.02 | 92.02 |
| CDY55745 | Canola | cytosol | 82.63 | 80.37 |
| CDX79430 | Canola | cytosol | 80.75 | 78.54 |
| CDX84764 | Canola | cytosol | 80.75 | 78.54 |
| Zm00001d031562_P001 | Maize | cytosol | 45.54 | 78.23 |
| Solyc09g097900.2.1 | Tomato | cytosol | 78.4 | 77.31 |
| PGSC0003DMT400042789 | Potato | cytosol | 77.93 | 76.85 |
| TraesCS7A01G256000.1 | Wheat | cytosol | 76.53 | 75.12 |
| TraesCS7B01G152600.1 | Wheat | cytosol | 76.06 | 74.65 |
| TraesCS7D01G254400.1 | Wheat | cytosol | 75.59 | 74.19 |
| GSMUA_Achr11P... | Banana | cytosol | 75.12 | 74.07 |
| HORVU7Hr1G052840.3 | Barley | cytosol | 76.06 | 73.97 |
| Os08t0525000-01 | Rice | plasma membrane | 74.65 | 73.61 |
| OQU80857 | Sorghum | cytosol | 74.65 | 73.61 |
| GSMUA_Achr11P... | Banana | cytosol | 72.3 | 70.97 |
| CDY06181 | Canola | cytosol | 80.75 | 70.78 |
| KRH55234 | Soybean | cytosol | 24.41 | 66.67 |
| CDY10008 | Canola | mitochondrion | 80.28 | 65.27 |
| CDY65720 | Canola | extracellular | 37.56 | 61.54 |
| CDX77774 | Canola | cytosol | 62.91 | 60.63 |
| CDY17729 | Canola | cytosol | 62.91 | 60.63 |
| CDY40561 | Canola | cytosol | 62.44 | 60.18 |
| CDY25963 | Canola | cytosol | 61.5 | 59.82 |
| CDY28925 | Canola | cytosol | 61.97 | 59.73 |
| CDY41053 | Canola | cytosol | 61.97 | 59.46 |
| CDY54837 | Canola | cytosol | 15.96 | 53.12 |
| CDX77609 | Canola | cytosol, plasma membrane | 52.58 | 51.85 |
| CDY39445 | Canola | cytosol | 52.58 | 51.85 |
| CDX96730 | Canola | cytosol | 50.7 | 47.79 |
| CDY51631 | Canola | cytosol | 22.54 | 47.52 |
| CDX83861 | Canola | cytosol | 50.23 | 47.35 |
| CDX72997 | Canola | cytosol | 50.23 | 46.52 |
| CDX83007 | Canola | cytosol | 23.0 | 43.75 |
| CDX96853 | Canola | mitochondrion | 27.7 | 39.33 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078JTF6 | UniProt:A0A078JTF6 | EnsemblPlants:CDY70114 | ProteinID:CDY70114 |
| ProteinID:CDY70114.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00096543001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF884 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0002547A84 |
Description
BnaAnng32660DBnaAnng32660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTF6]
Coordinates
chrLK041209:+:1744..2994
Molecular Weight (calculated)
23814.9 Da
IEP (calculated)
4.751
GRAVY (calculated)
-0.385
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDDERCEEY LFKIVIIGDS AVGKSNLLTR YARNEFNPNS KATIGVEFQT QSMLIDNKEV KAQIWDTAGQ ERFRAVTSAY YRGAVGALVV YDITRTSTFE
101: NVGRWLDELN THSDTTVAKM LIGNKCDLES IRAVSIEEGK SLAESQGLFF METSALDSTN VSTAFEMVIR DIYGNISRKQ LNSDSYKEEV TGNRVSLVKN
201: ESEGTKSFSC CSR
101: NVGRWLDELN THSDTTVAKM LIGNKCDLES IRAVSIEEGK SLAESQGLFF METSALDSTN VSTAFEMVIR DIYGNISRKQ LNSDSYKEEV TGNRVSLVKN
201: ESEGTKSFSC CSR
001: MSDDDERGEE YLFKIVIIGD SAVGKSNLLT RYARNEFNPN SKATIGVEFQ TQSMLIDGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDITRSSTF
101: ENVGRWLDEL NTHSDTTVAK MLIGNKCDLE SIRAVSVEEG KSLAESEGLF FMETSALDST NVKTAFEMVI REIYSNISRK QLNSDSYKEE LTVNRVSLVK
201: NENEGTKTFS CCSR
101: ENVGRWLDEL NTHSDTTVAK MLIGNKCDLE SIRAVSVEEG KSLAESEGLF FMETSALDST NVKTAFEMVI REIYSNISRK QLNSDSYKEE LTVNRVSLVK
201: NENEGTKTFS CCSR
Arabidopsis Description
RABA5CRas-related protein RABA5c [Source:UniProtKB/Swiss-Prot;Acc:P28187]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.