CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77609	Canola	cytosol, plasma membrane	100.0	100.0
Bra025060.1-P	Field mustard	cytosol	99.54	99.54
VIT_10s0003g01620.t01	Wine grape	cytosol	31.94	79.31
Zm00001d005612_P001	Maize	cytosol	39.81	77.48
CDY54837	Canola	cytosol	19.91	67.19
Os01t0667600-01	Rice	cytosol, golgi, plasma membrane, plastid	69.44	66.96
KRG93819	Soybean	cytosol	29.17	66.32
OQU87831	Sorghum	cytosol	29.63	63.37
GSMUA_Achr7P23610_001	Banana	cytosol	50.46	61.58
CDY51631	Canola	cytosol	28.24	60.4
OQU77614	Sorghum	cytosol	27.31	56.73
CDX96853	Canola	mitochondrion	38.43	55.33
CDX72997	Canola	cytosol	57.41	53.91
CDY41053	Canola	cytosol	55.09	53.6
CDX83007	Canola	cytosol	27.78	53.57
CDY25963	Canola	cytosol	54.17	53.42
CDY17729	Canola	cytosol	54.63	53.39
CDX77774	Canola	cytosol	54.63	53.39
CDY17945	Canola	cytosol	52.31	53.05
CDY40561	Canola	cytosol	54.17	52.94
CDY28925	Canola	cytosol	54.17	52.94
CDY70114	Canola	cytosol	51.85	52.58
CDX83500	Canola	cytosol	51.85	52.58
CDY42801	Canola	cytosol	51.39	52.11
CDX96730	Canola	cytosol	54.17	51.77
CDX83861	Canola	cytosol	53.24	50.88
CDX84764	Canola	cytosol	50.93	50.23
CDX79430	Canola	cytosol	50.93	50.23
CDY55745	Canola	cytosol	49.54	48.86
CDY06181	Canola	cytosol	52.31	46.5
CDY10008	Canola	mitochondrion	52.31	43.13
Zm00001d020102_P001	Maize	cytosol	31.94	34.33
CDY65720	Canola	extracellular	20.37	33.85
Zm00001d032569_P001	Maize	plastid	18.52	23.81

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:A0A078HLV7	UniProt:A0A078HLV7	EnsemblPlants:CDY39445	ProteinID:CDY39445
ProteinID:CDY39445.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00067910001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF592	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00019AA8C1
SEG:seg	:	:	:	:	:

Description

BnaAnng05760DBnaAnng05760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLV7]

Coordinates

chrLK032447:+:281045..282298

Molecular Weight (calculated)

23777.0 Da

IEP (calculated)

5.388

GRAVY (calculated)

-0.271

Length

216 amino acids

Sequence
(BLAST)

001: MAGYKADDEY DYLFKVVLIG DSGVGKSNLL SRFTKNEFSL ESKSTIGVEF ATRSLNVDDK VIKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHST
101: FENVETWLKE LRNHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAEKESL CFMETSALES TNVEDAFAQV LTQIHSIVSK KAMEAASESA NAPSRGDKIE
201: IGKDVSAVKK AGCCSN

Best Arabidopsis Sequence Match ( AT5G45750.1 )
(BLAST)

001: MAGYRADDEY DYLFKVVLIG DSGVGKSNLL SRFTKNEFSL ESKSTIGVEF ATRSLNVDDK VIKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHST
101: FENVETWLKE LRNHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAEKESL YFMETSALEA TNVENAFAEV LTQIHHIVSK KAMEAASESA NVPSKGDKID
201: IGKDVSAVKK GGCCSN

Arabidopsis Description

RABA1CRABA1c [Source:UniProtKB/TrEMBL;Acc:A0A178UDB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.