Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017482.1-P | Field mustard | cytosol | 99.54 | 98.2 |
| CDY41053 | Canola | cytosol | 99.54 | 98.2 |
| CDX77774 | Canola | cytosol | 96.35 | 95.48 |
| CDY17729 | Canola | cytosol | 96.35 | 95.48 |
| AT5G47520.1 | Thale cress | cytosol | 95.89 | 95.02 |
| CDY40561 | Canola | cytosol | 93.15 | 92.31 |
| CDY28925 | Canola | cytosol | 93.15 | 92.31 |
| KRH34233 | Soybean | cytosol | 87.21 | 85.65 |
| KRG92561 | Soybean | cytosol | 86.76 | 84.07 |
| PGSC0003DMT400034567 | Potato | cytosol | 84.02 | 81.78 |
| PGSC0003DMT400021794 | Potato | cytosol | 82.19 | 79.65 |
| Zm00001d022251_P002 | Maize | cytosol | 79.91 | 78.83 |
| EER97606 | Sorghum | cytosol | 79.91 | 78.83 |
| Solyc05g054150.2.1 | Tomato | cytosol | 81.28 | 78.76 |
| Os07t0634200-01 | Rice | plasma membrane | 78.54 | 78.18 |
| GSMUA_Achr2P15860_001 | Banana | cytosol | 79.45 | 77.68 |
| TraesCS2D01G158800.1 | Wheat | cytosol | 78.54 | 77.13 |
| HORVU2Hr1G027660.2 | Barley | cytosol | 78.08 | 76.68 |
| TraesCS2A01G153500.1 | Wheat | cytosol | 77.63 | 76.23 |
| GSMUA_Achr6P00700_001 | Banana | cytosol | 75.8 | 75.45 |
| GSMUA_Achr5P06170_001 | Banana | cytosol | 56.16 | 72.78 |
| TraesCS2B01G178600.1 | Wheat | cytosol | 77.17 | 71.91 |
| Solyc11g012460.1.1 | Tomato | plastid | 83.56 | 66.3 |
| CDX83500 | Canola | cytosol | 60.27 | 61.97 |
| CDY55745 | Canola | cytosol | 61.64 | 61.64 |
| CDY42801 | Canola | cytosol | 59.82 | 61.5 |
| CDY70114 | Canola | cytosol | 59.82 | 61.5 |
| CDY17945 | Canola | cytosol | 59.82 | 61.5 |
| CDX84764 | Canola | cytosol | 60.73 | 60.73 |
| CDX79430 | Canola | cytosol | 60.73 | 60.73 |
| CDY06181 | Canola | cytosol | 62.56 | 56.38 |
| CDY54837 | Canola | cytosol | 16.44 | 56.25 |
| CDX77609 | Canola | cytosol, plasma membrane | 53.42 | 54.17 |
| CDY39445 | Canola | cytosol | 53.42 | 54.17 |
| CDY10008 | Canola | mitochondrion | 63.01 | 52.67 |
| CDX96730 | Canola | cytosol | 52.05 | 50.44 |
| CDX83861 | Canola | cytosol | 51.14 | 49.56 |
| CDX83007 | Canola | cytosol | 24.66 | 48.21 |
| CDX72997 | Canola | cytosol | 49.77 | 47.39 |
| CDY51631 | Canola | cytosol | 21.46 | 46.53 |
| CDX96853 | Canola | mitochondrion | 30.14 | 44.0 |
| CDY65720 | Canola | extracellular | 25.11 | 42.31 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078GMW3 | UniProt:A0A078GMW3 | EnsemblPlants:CDY25963 | ProteinID:CDY25963 |
| ProteinID:CDY25963.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00033475001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF430 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EB58F3 |
Description
BnaC09g20240DBnaC09g20240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMW3]
Coordinates
chrLK032183:+:347826..348575
Molecular Weight (calculated)
24189.6 Da
IEP (calculated)
6.526
GRAVY (calculated)
-0.309
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFHSEDDRS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKIDING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRKQ
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDIREVPTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSEAQ GEAKKGGCC
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDIREVPTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSEAQ GEAKKGGCC
001: MAFYSEDDKS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKMDING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRRQ
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S
Arabidopsis Description
RABA5ARas-related protein RABA5a [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.