Factsheet for GSMUA_Achr5P06170_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P15860_001	Banana	cytosol	82.84	62.5
EER97606	Sorghum	cytosol	81.07	61.71
Zm00001d022251_P002	Maize	cytosol	79.88	60.81
Os07t0634200-01	Rice	plasma membrane	78.7	60.45
HORVU2Hr1G027660.2	Barley	cytosol	79.29	60.09
TraesCS2D01G158800.1	Wheat	cytosol	78.7	59.64
TraesCS2A01G153500.1	Wheat	cytosol	78.7	59.64
GSMUA_Achr6P00700_001	Banana	cytosol	76.92	59.09
AT5G47520.1	Thale cress	cytosol	75.74	57.92
KRH34233	Soybean	cytosol	76.33	57.85
KRG92561	Soybean	cytosol	76.33	57.08
CDY17729	Canola	cytosol	73.96	56.56
TraesCS2B01G178600.1	Wheat	cytosol	78.11	56.17
CDY25963	Canola	cytosol	72.78	56.16
PGSC0003DMT400034567	Potato	cytosol	74.56	56.0
Bra017482.1-P	Field mustard	cytosol	73.37	55.86
CDY41053	Canola	cytosol	73.37	55.86
Bra024937.1-P	Field mustard	cytosol	73.37	55.86
CDX77774	Canola	cytosol	72.78	55.66
CDY40561	Canola	cytosol	71.6	54.75
CDY28925	Canola	cytosol	71.6	54.75
Bra022136.1-P	Field mustard	cytosol	71.6	54.75
PGSC0003DMT400021794	Potato	cytosol	71.6	53.54
Solyc05g054150.2.1	Tomato	cytosol	71.01	53.1
GSMUA_Achr8P28380_001	Banana	cytosol	58.58	52.66
GSMUA_Achr2P06080_001	Banana	plasma membrane	59.76	47.2
GSMUA_Achr11P...	Banana	cytosol	59.17	46.08
GSMUA_Achr11P...	Banana	cytosol	58.58	45.83
Solyc11g012460.1.1	Tomato	plastid	72.78	44.57
GSMUA_Achr1P13510_001	Banana	cytosol	26.04	36.36
GSMUA_Achr2P22260_001	Banana	cytosol	21.3	34.95
GSMUA_Achr7P23610_001	Banana	cytosol	34.32	32.77

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr5G06170_001	EnsemblPlants:GSMUA_Achr5P06170_001	EnsemblPlants:GSMUA_Achr5T06170_001
UniProt:M0SW46	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF430	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000295E38B	:	:	:

Description

Ras-related protein ARA-1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G06170_001]

Coordinates

chr5:+:4566559..4567397

Molecular Weight (calculated)

18597.9 Da

IEP (calculated)

5.600

GRAVY (calculated)

-0.250

Length

169 amino acids

Sequence
(BLAST)

001: MDIDGKEVKA QIWDTAGQER FKAVTSAYYR GAVGALLVYD VSRHQTFDSV GRWLQELHMH SDMNVVTILV GNKTDLKDAR EVSTAEGKTL AEAQGLFFME
101: TSALDSSNVA AAFQTVVEEI YHAVSRKVFL SQEQQKHEMP SLTNGKTVVL LGDTKDASGG TRGFWCCSS

Best Arabidopsis Sequence Match ( AT1G05810.1 )
(BLAST)

001: MSSDDEGREE YLFKIVVIGD SAVGKSNLLS RYARNEFSAN SKATIGVEFQ TQSMEIEGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDITRRTTF
101: ESVGRWLDEL KIHSDTTVAR MLVGNKCDLE NIRAVSVEEG KALAEEEGLF FVETSALDST NVKTAFEMVI LDIYNNVSRK QLNSDTYKDE LTVNRVSLVK
201: DDNSASKQSS GFSCCSST

Arabidopsis Description

ARARAB GTPase homolog A5E [Source:TAIR;Acc:AT1G05810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.