Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17729 | Canola | cytosol | 95.93 | 95.93 |
| CDY25963 | Canola | cytosol | 95.02 | 95.89 |
| CDY41053 | Canola | cytosol | 95.93 | 95.5 |
| Bra017482.1-P | Field mustard | cytosol | 95.93 | 95.5 |
| CDX77774 | Canola | cytosol | 95.02 | 95.02 |
| Bra024937.1-P | Field mustard | cytosol | 94.57 | 94.14 |
| Bra022136.1-P | Field mustard | cytosol | 92.76 | 92.76 |
| CDY40561 | Canola | cytosol | 92.31 | 92.31 |
| CDY28925 | Canola | cytosol | 92.31 | 92.31 |
| KRH34233 | Soybean | cytosol | 89.14 | 88.34 |
| KRG92561 | Soybean | cytosol | 88.69 | 86.73 |
| PGSC0003DMT400034567 | Potato | cytosol | 84.62 | 83.11 |
| PGSC0003DMT400021794 | Potato | cytosol | 83.26 | 81.42 |
| Solyc05g054150.2.1 | Tomato | cytosol | 82.35 | 80.53 |
| Os07t0634200-01 | Rice | plasma membrane | 80.09 | 80.45 |
| EER97606 | Sorghum | cytosol | 80.54 | 80.18 |
| Zm00001d022251_P002 | Maize | cytosol | 80.09 | 79.73 |
| GSMUA_Achr2P15860_001 | Banana | cytosol | 80.54 | 79.46 |
| HORVU2Hr1G027660.2 | Barley | cytosol | 79.19 | 78.48 |
| TraesCS2A01G153500.1 | Wheat | cytosol | 78.73 | 78.03 |
| TraesCS2D01G158800.1 | Wheat | cytosol | 78.73 | 78.03 |
| GSMUA_Achr6P00700_001 | Banana | cytosol | 77.38 | 77.73 |
| GSMUA_Achr5P06170_001 | Banana | cytosol | 57.92 | 75.74 |
| TraesCS2B01G178600.1 | Wheat | cytosol | 77.38 | 72.77 |
| Solyc11g012460.1.1 | Tomato | plastid | 83.26 | 66.67 |
| AT2G31680.1 | Thale cress | cytosol | 62.9 | 63.47 |
| AT3G07410.1 | Thale cress | cytosol | 61.99 | 63.13 |
| AT2G43130.1 | Thale cress | cytosol | 60.63 | 62.62 |
| AT1G05810.2 | Thale cress | plastid | 62.9 | 52.65 |
| AT1G18200.1 | Thale cress | cytosol | 51.58 | 49.78 |
| AT1G73640.1 | Thale cress | cytosol | 49.77 | 47.21 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:834802 | ProteinID:AED95528.1 | EMBL:AK222160 | EMBL:AK227772 |
| ArrayExpress:AT5G47520 | EnsemblPlantsGene:AT5G47520 | RefSeq:AT5G47520 | TAIR:AT5G47520 | RefSeq:AT5G47520-TAIR-G | EnsemblPlants:AT5G47520.1 |
| TAIR:AT5G47520.1 | Symbol:AtRABA5a | ProteinID:BAB09078.1 | EMBL:BT004809 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_199563.1 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF430 | UniProt:Q9FGK5 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI000000C49E | : | : | : | : |
Description
RABA5ARas-related protein RABA5a [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK5]
Coordinates
chr5:-:19277230..19279747
Molecular Weight (calculated)
24445.9 Da
IEP (calculated)
6.286
GRAVY (calculated)
-0.322
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFYSEDDKS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKMDING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRRQ
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.