Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015978.1-P | Field mustard | cytosol | 92.27 | 92.67 |
| CDX72997 | Canola | cytosol | 90.13 | 91.3 |
| AT1G18200.1 | Thale cress | cytosol | 81.97 | 83.41 |
| KRH48616 | Soybean | cytosol | 24.89 | 78.38 |
| VIT_17s0000g02500.t01 | Wine grape | cytosol | 70.39 | 75.23 |
| KRH41826 | Soybean | cytosol | 63.95 | 68.35 |
| KRH39102 | Soybean | cytosol | 52.79 | 68.33 |
| KRH60507 | Soybean | cytosol | 62.66 | 67.28 |
| PGSC0003DMT400014741 | Potato | cytosol | 63.52 | 66.37 |
| KRH48618 | Soybean | cytosol | 38.63 | 62.94 |
| Solyc03g118820.2.1 | Tomato | plastid | 64.81 | 62.4 |
| AT3G07410.1 | Thale cress | cytosol | 46.78 | 50.23 |
| AT5G47520.1 | Thale cress | cytosol | 47.21 | 49.77 |
| AT2G43130.1 | Thale cress | cytosol | 44.64 | 48.6 |
| AT2G31680.1 | Thale cress | cytosol | 44.21 | 47.03 |
| AT1G05810.2 | Thale cress | plastid | 46.35 | 40.91 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:843698 | UniProt:A0A178W207 | ProteinID:AAG52089.1 | ProteinID:AEE35488.1 |
| ArrayExpress:AT1G73640 | EnsemblPlantsGene:AT1G73640 | RefSeq:AT1G73640 | TAIR:AT1G73640 | RefSeq:AT1G73640-TAIR-G | EnsemblPlants:AT1G73640.1 |
| TAIR:AT1G73640.1 | EMBL:AY084805 | Symbol:AtRABA6a | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_177505.1 | ProteinID:OAP12537.1 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF544 | UniProt:Q9C9U7 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI000005EC53 | : | : | : | : |
Description
RABA6ARas-related protein RABA6a [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U7]
Coordinates
chr1:+:27686672..27688127
Molecular Weight (calculated)
26040.7 Da
IEP (calculated)
4.814
GRAVY (calculated)
-0.281
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDTYEEEC DYLFKAVLIG DSAVGKSNLL SRFSKDEFRF DSKPTIGVEF AYRNVHVGDK IIKAQIWDTA GQERFRAITS SYYRGALGAL LIYDITRRTT
101: FDNIKKWLFE LRDFANPETV VVLVGNKSDL RQSREVEEDE GKTLAESEGL YFLETSALEN VNVEEAFLVM IGRIHEVVTQ RIASENKSNG AATPHINGNG
201: NGTVLPVGKE IVNIHEVTAT QPLLSSSSNC CFK
101: FDNIKKWLFE LRDFANPETV VVLVGNKSDL RQSREVEEDE GKTLAESEGL YFLETSALEN VNVEEAFLVM IGRIHEVVTQ RIASENKSNG AATPHINGNG
201: NGTVLPVGKE IVNIHEVTAT QPLLSSSSNC CFK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.