CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48618	Soybean	cytosol	70.56	88.81
KRH41826	Soybean	cytosol	80.56	66.51
KRH60507	Soybean	cytosol	80.0	66.36
VIT_17s0000g02500.t01	Wine grape	cytosol	73.89	61.01
KRH48616	Soybean	cytosol	25.0	60.81
PGSC0003DMT400014741	Potato	cytosol	69.44	56.05
Bra016565.1-P	Field mustard	cytosol	67.78	53.98
CDX96730	Canola	cytosol	67.78	53.98
CDX72997	Canola	cytosol	68.89	53.91
Bra015978.1-P	Field mustard	cytosol	69.44	53.88
AT1G18200.1	Thale cress	cytosol	67.78	53.28
CDX83861	Canola	cytosol	66.67	53.1
AT1G73640.1	Thale cress	cytosol	68.33	52.79
Solyc03g118820.2.1	Tomato	plastid	68.89	51.24
KRH46603	Soybean	cytosol	51.11	43.19
KRH46865	Soybean	endoplasmic reticulum	50.0	41.1
KRH01822	Soybean	cytosol	50.0	41.1
KRH34233	Soybean	cytosol	50.56	40.81
KRG92561	Soybean	cytosol	50.56	40.27
KRG93819	Soybean	cytosol	20.0	37.89
KRH55234	Soybean	cytosol	15.56	35.9

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EMBL:ACUP02005915	EnsemblPlantsGene:GLYMA_09G177700	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0016787	UniProt:K7LEK2	EnsemblPlants:KRH39102
ProteinID:KRH39102	ProteinID:KRH39102.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF486	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000294DD40	:

Description

hypothetical protein

Coordinates

chr9:-:40233258..40237721

Molecular Weight (calculated)

20038.0 Da

IEP (calculated)

8.318

GRAVY (calculated)

-0.359

Length

180 amino acids

Sequence
(BLAST)

001: CIGESGVGKS NLISRFAKDE FRLDSKPSIG VRDKLIKAQI WDTAGQERFR AITSSYYRGA LGAMLVYDIT KRATFVNVGK WLHELREFGG EDMVVVLVRN
101: KSDLDQSRQV EREKGKGFAE TEGLCFMETS ALQNLNIHDI ISQKSLETKM NGAALNLPSG KEIHIADEVT ATKQAKYCCS

Best Arabidopsis Sequence Match ( AT1G16920.1 )
(BLAST)

001: MAGYRVEDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATRTLKVDGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRRAT
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN

Arabidopsis Description

RABA1BRABA1b [Source:UniProtKB/TrEMBL;Acc:A0A178WJV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.