CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01822	Soybean	cytosol	91.03	32.42
KRH46865	Soybean	endoplasmic reticulum	88.46	31.51
KRH46603	Soybean	cytosol	75.64	27.7
AT2G43130.1	Thale cress	cytosol	70.51	25.7
AT2G31680.1	Thale cress	cytosol	69.23	24.66
GSMUA_Achr11P...	Banana	cytosol	67.95	24.54
Bra004747.1-P	Field mustard	cytosol	66.67	24.41
CDY70114	Canola	cytosol	66.67	24.41
Solyc09g097900.2.1	Tomato	cytosol	66.67	24.07
CDY17945	Canola	cytosol	65.38	23.94
CDY42801	Canola	cytosol	65.38	23.94
CDX79430	Canola	cytosol	66.67	23.74
PGSC0003DMT400042789	Potato	cytosol	65.38	23.61
GSMUA_Achr11P...	Banana	cytosol	65.38	23.5
Bra000290.1-P	Field mustard	cytosol	64.1	23.47
CDX83500	Canola	cytosol	64.1	23.47
Bra032453.1-P	Field mustard	cytosol	65.38	23.39
CDX84764	Canola	cytosol	65.38	23.29
Bra022861.1-P	Field mustard	cytosol	64.1	22.94
CDY55745	Canola	cytosol	64.1	22.83
Bra005650.1-P	Field mustard	cytosol	64.1	22.83
Os08t0525000-01	Rice	plasma membrane	62.82	22.69
TraesCS7A01G256000.1	Wheat	cytosol	62.82	22.58
TraesCS7D01G254400.1	Wheat	cytosol	62.82	22.58
KRH48618	Soybean	cytosol	41.03	22.38
OQU80857	Sorghum	cytosol	61.54	22.22
TraesCS7B01G152600.1	Wheat	cytosol	61.54	22.12
HORVU7Hr1G052840.3	Barley	cytosol	61.54	21.92
CDY06181	Canola	cytosol	66.67	21.4
AT1G05810.2	Thale cress	plastid	71.79	21.21
CDY10008	Canola	mitochondrion	65.38	19.47
KRH34233	Soybean	cytosol	48.72	17.04
KRG92561	Soybean	cytosol	48.72	16.81
KRH39102	Soybean	cytosol	35.9	15.56
KRH60507	Soybean	cytosol	42.31	15.21
KRH41826	Soybean	cytosol	42.31	15.14
KRG93819	Soybean	cytosol	3.85	3.16
Zm00001d031562_P001	Maize	cytosol	1.28	0.81
KRH48616	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02003927	EnsemblPlants:KRH55234	EnsemblPlantsGene:GLYMA_06G238800	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase
InterPro:Small_GTPase	PANTHER:PTHR24073	PANTHER:PTHR24073:SF884	PFAM:PF00071	PFscan:PS51419	ProteinID:KRH55234
ProteinID:KRH55234.1	SUPFAM:SSF52540	UniParc:UPI00029634DF	UniProt:K7KX01	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr6:+:39026541..39026837

Molecular Weight (calculated)

8525.1 Da

IEP (calculated)

4.439

GRAVY (calculated)

-0.172

Length

78 amino acids

Sequence
(BLAST)

1: MLVGNKCDLE NIRAVNIDEG KSLAEAEGLF FMETSVLDST NVKTAFEMAE LSVNRVSLVN NGASTSKQNQ PYFSCCSR

Best Arabidopsis Sequence Match ( AT1G05810.1 )
(BLAST)

001: MSSDDEGREE YLFKIVVIGD SAVGKSNLLS RYARNEFSAN SKATIGVEFQ TQSMEIEGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDITRRTTF
101: ESVGRWLDEL KIHSDTTVAR MLVGNKCDLE NIRAVSVEEG KALAEEEGLF FVETSALDST NVKTAFEMVI LDIYNNVSRK QLNSDTYKDE LTVNRVSLVK
201: DDNSASKQSS GFSCCSST

Arabidopsis Description

ARARAB GTPase homolog A5E [Source:TAIR;Acc:AT1G05810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.