Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42801 | Canola | cytosol | 96.73 | 97.18 |
| Bra000290.1-P | Field mustard | cytosol | 96.26 | 96.71 |
| CDX83500 | Canola | cytosol | 96.26 | 96.71 |
| CDY17945 | Canola | cytosol | 95.33 | 95.77 |
| CDY70114 | Canola | cytosol | 93.93 | 94.37 |
| Bra004747.1-P | Field mustard | cytosol | 93.93 | 94.37 |
| AT2G31680.1 | Thale cress | cytosol | 85.98 | 84.02 |
| Solyc09g097900.2.1 | Tomato | cytosol | 79.91 | 79.17 |
| PGSC0003DMT400042789 | Potato | cytosol | 79.44 | 78.7 |
| Zm00001d031562_P001 | Maize | cytosol | 45.33 | 78.23 |
| TraesCS7A01G256000.1 | Wheat | cytosol | 78.97 | 77.88 |
| GSMUA_Achr11P... | Banana | cytosol | 78.5 | 77.78 |
| TraesCS7B01G152600.1 | Wheat | cytosol | 78.5 | 77.42 |
| TraesCS7D01G254400.1 | Wheat | cytosol | 78.04 | 76.96 |
| OQU80857 | Sorghum | cytosol | 77.1 | 76.39 |
| Os08t0525000-01 | Rice | plasma membrane | 77.1 | 76.39 |
| HORVU7Hr1G052840.3 | Barley | cytosol | 78.04 | 76.26 |
| AT3G07410.1 | Thale cress | cytosol | 77.1 | 76.04 |
| GSMUA_Achr11P... | Banana | cytosol | 74.77 | 73.73 |
| KRH55234 | Soybean | cytosol | 25.7 | 70.51 |
| AT1G05810.2 | Thale cress | plastid | 84.58 | 68.56 |
| AT5G47520.1 | Thale cress | cytosol | 62.62 | 60.63 |
| AT1G18200.1 | Thale cress | cytosol | 50.47 | 47.16 |
| AT1G73640.1 | Thale cress | cytosol | 48.6 | 44.64 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:818915 | ProteinID:AAC64302.1 | ProteinID:AEC10212.1 | EMBL:AK317205 |
| Symbol:ARA4 | ArrayExpress:AT2G43130 | EnsemblPlantsGene:AT2G43130 | RefSeq:AT2G43130 | TAIR:AT2G43130 | RefSeq:AT2G43130-TAIR-G |
| EnsemblPlants:AT2G43130.1 | TAIR:AT2G43130.1 | EMBL:BT025784 | EMBL:D01026 | GO:GO:0000139 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005795 |
| GO:GO:0005798 | GO:GO:0005802 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0048219 |
| RefSeq:NP_181842.1 | InterPro:P-loop_NTPase | UniProt:P28187 | PFAM:PF00071 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF884 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0000125D4D |
Description
RABA5CRas-related protein RABA5c [Source:UniProtKB/Swiss-Prot;Acc:P28187]
Coordinates
chr2:-:17929607..17931027
Molecular Weight (calculated)
23982.1 Da
IEP (calculated)
4.692
GRAVY (calculated)
-0.409
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDDDERGEE YLFKIVIIGD SAVGKSNLLT RYARNEFNPN SKATIGVEFQ TQSMLIDGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDITRSSTF
101: ENVGRWLDEL NTHSDTTVAK MLIGNKCDLE SIRAVSVEEG KSLAESEGLF FMETSALDST NVKTAFEMVI REIYSNISRK QLNSDSYKEE LTVNRVSLVK
201: NENEGTKTFS CCSR
101: ENVGRWLDEL NTHSDTTVAK MLIGNKCDLE SIRAVSVEEG KSLAESEGLF FMETSALDST NVKTAFEMVI REIYSNISRK QLNSDSYKEE LTVNRVSLVK
201: NENEGTKTFS CCSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.