Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040376.1-P | Field mustard | cytosol | 94.01 | 95.77 |
| KRH46603 | Soybean | cytosol | 79.72 | 81.22 |
| PGSC0003DMT400013853 | Potato | cytosol | 76.5 | 79.05 |
| Solyc09g056340.2.1 | Tomato | cytosol | 76.5 | 79.05 |
| VIT_07s0141g00770.t01 | Wine grape | cytosol | 77.88 | 78.6 |
| AT2G43130.1 | Thale cress | cytosol | 76.04 | 77.1 |
| AT2G31680.1 | Thale cress | cytosol | 76.04 | 75.34 |
| AT1G05810.2 | Thale cress | plastid | 76.96 | 63.26 |
| AT5G47520.1 | Thale cress | cytosol | 63.13 | 61.99 |
| CDY65720 | Canola | extracellular | 35.02 | 58.46 |
| GSMUA_Achr1P13510_001 | Banana | cytosol | 29.49 | 52.89 |
| AT1G18200.1 | Thale cress | cytosol | 50.69 | 48.03 |
| AT1G73640.1 | Thale cress | cytosol | 50.23 | 46.78 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:819929 | UniProt:A0A178VPD1 | ProteinID:AAF02165.1 | ProteinID:AEE74539.1 |
| ArrayExpress:AT3G07410 | EnsemblPlantsGene:AT3G07410 | RefSeq:AT3G07410 | TAIR:AT3G07410 | RefSeq:AT3G07410-TAIR-G | EnsemblPlants:AT3G07410.1 |
| TAIR:AT3G07410.1 | EMBL:AY072444 | Unigene:At.43319 | Symbol:AtRABA5b | EMBL:BT002173 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016787 | RefSeq:NP_187397.1 | ProteinID:OAP07075.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF884 | UniProt:Q9SRS5 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000AC490 |
| SEG:seg | : | : | : | : | : |
Description
RABA5BRas-related protein RABA5b [Source:UniProtKB/Swiss-Prot;Acc:Q9SRS5]
Coordinates
chr3:-:2372317..2373556
Molecular Weight (calculated)
24321.4 Da
IEP (calculated)
4.462
GRAVY (calculated)
-0.364
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKEDDRGEE YLFKIVLIGD SAVGKSNLLS RFSRDEFDTN SKATIGVEFQ TQLVEIEGKE VKAQIWDTAG QERFRAVTSA YYRGAFGALI VYDITRGDTF
101: ESVKRWLQEL NTHCDTAVAQ MLVGNKCDLE DIRAVSVEEG KALAEEEGLF FMETSALDAT NVDKAFEIVI REIFNNVSRK LLNSDAYKAE LSVNRVSLVN
201: NQDGSESSWR NPSCCSR
101: ESVKRWLQEL NTHCDTAVAQ MLVGNKCDLE DIRAVSVEEG KALAEEEGLF FMETSALDAT NVDKAFEIVI REIFNNVSRK LLNSDAYKAE LSVNRVSLVN
201: NQDGSESSWR NPSCCSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.