Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55745 | Canola | cytosol | 94.06 | 94.06 |
| Bra005650.1-P | Field mustard | cytosol | 94.06 | 94.06 |
| CDX84764 | Canola | cytosol | 92.69 | 92.69 |
| CDX79430 | Canola | cytosol | 92.24 | 92.24 |
| Bra022861.1-P | Field mustard | cytosol | 91.78 | 92.2 |
| AT2G43130.1 | Thale cress | cytosol | 84.02 | 85.98 |
| Solyc09g097900.2.1 | Tomato | cytosol | 79.45 | 80.56 |
| PGSC0003DMT400042789 | Potato | cytosol | 79.0 | 80.09 |
| GSMUA_Achr11P... | Banana | cytosol | 77.63 | 78.7 |
| TraesCS7D01G254400.1 | Wheat | cytosol | 77.63 | 78.34 |
| Zm00001d031562_P001 | Maize | cytosol | 44.29 | 78.23 |
| TraesCS7A01G256000.1 | Wheat | cytosol | 76.71 | 77.42 |
| Os08t0525000-01 | Rice | plasma membrane | 76.26 | 77.31 |
| TraesCS7B01G152600.1 | Wheat | cytosol | 76.26 | 76.96 |
| OQU80857 | Sorghum | cytosol | 75.8 | 76.85 |
| HORVU7Hr1G052840.3 | Barley | cytosol | 76.26 | 76.26 |
| AT3G07410.1 | Thale cress | cytosol | 75.34 | 76.04 |
| GSMUA_Achr11P... | Banana | cytosol | 74.43 | 75.12 |
| AT1G05810.2 | Thale cress | plastid | 89.04 | 73.86 |
| KRH55234 | Soybean | cytosol | 24.66 | 69.23 |
| AT5G47520.1 | Thale cress | cytosol | 63.47 | 62.9 |
| AT1G18200.1 | Thale cress | cytosol | 48.86 | 46.72 |
| AT1G73640.1 | Thale cress | cytosol | 47.03 | 44.21 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:817724 | EntrezGene:837091 | UniProt:A0A178VPP2 | ProteinID:AAC13655.1 |
| ProteinID:AAD24853.1 | ProteinID:AAF29387.1 | ProteinID:AEC08572.1 | ProteinID:AEE27897.2 | EMBL:AF332457 | EMBL:AK227705 |
| ArrayExpress:AT2G31680 | EnsemblPlantsGene:AT2G31680 | RefSeq:AT2G31680 | TAIR:AT2G31680 | RefSeq:AT2G31680-TAIR-G | EnsemblPlants:AT2G31680.1 |
| TAIR:AT2G31680.1 | EMBL:AY063847 | EMBL:AY085494 | Unigene:At.66393 | Symbol:AtRABA5d | EMBL:BT006190 |
| EMBL:BT009720 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 |
| RefSeq:NP_001318930.1 | RefSeq:NP_180726.1 | ProteinID:OAP07794.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF884 | UniProt:Q9SIP0 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI000009E390 | : | : | : | : | : |
Description
RABA5DRas-related protein RABA5d [Source:UniProtKB/Swiss-Prot;Acc:Q9SIP0]
Coordinates
chr2:-:13473594..13475085
Molecular Weight (calculated)
24362.6 Da
IEP (calculated)
5.009
GRAVY (calculated)
-0.392
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSDDEGGEE YLFKIVIIGD SAVGKSNLLS RYARNEFNAH SKATIGVEFQ TQNMEIEGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDISRRSTF
101: ESVGRWLDEL KTHSDTTVAR MLVGNKCDLE SIRAVSVEEG KALAETEGLF FMETSALDST NVKTAFEMVI RDIYTNISRK QLNSDTYKTE LSMKNRVSLV
201: KDDNKSSTQG FGFSCCSSS
101: ESVGRWLDEL KTHSDTTVAR MLVGNKCDLE SIRAVSVEEG KALAETEGLF FMETSALDST NVKTAFEMVI RDIYTNISRK QLNSDTYKTE LSMKNRVSLV
201: KDDNKSSTQG FGFSCCSSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.