Factsheet for Zm00001d031562_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80857	Sorghum	cytosol	88.71	50.93
TraesCS7A01G256000.1	Wheat	cytosol	87.9	50.23
TraesCS7D01G254400.1	Wheat	cytosol	87.9	50.23
TraesCS7B01G152600.1	Wheat	cytosol	87.9	50.23
Os08t0525000-01	Rice	plasma membrane	87.1	50.0
HORVU7Hr1G052840.3	Barley	cytosol	87.9	49.77
CDX83500	Canola	cytosol	79.03	46.01
CDY42801	Canola	cytosol	79.03	46.01
Bra000290.1-P	Field mustard	cytosol	79.03	46.01
Bra004747.1-P	Field mustard	cytosol	78.23	45.54
CDY17945	Canola	cytosol	78.23	45.54
CDY70114	Canola	cytosol	78.23	45.54
Zm00001d048223_P001	Maize	cytosol	41.13	45.54
AT2G43130.1	Thale cress	cytosol	78.23	45.33
Zm00001d011095_P001	Maize	cytosol	30.65	44.71
GSMUA_Achr11P...	Banana	cytosol	77.42	44.44
Solyc09g097900.2.1	Tomato	cytosol	77.42	44.44
PGSC0003DMT400042789	Potato	cytosol	77.42	44.44
AT2G31680.1	Thale cress	cytosol	78.23	44.29
CDX79430	Canola	cytosol	78.23	44.29
CDX84764	Canola	cytosol	78.23	44.29
Zm00001d005612_P001	Maize	cytosol	39.52	44.14
Bra022861.1-P	Field mustard	cytosol	76.61	43.58
Zm00001d012954_P001	Maize	cytosol	26.61	43.42
CDY55745	Canola	cytosol	76.61	43.38
Bra005650.1-P	Field mustard	cytosol	76.61	43.38
GSMUA_Achr11P...	Banana	cytosol	75.81	43.32
Bra032453.1-P	Field mustard	cytosol	75.0	42.66
CDY06181	Canola	cytosol	75.0	38.27
Zm00001d022251_P002	Maize	cytosol	67.74	37.84
AT1G05810.2	Thale cress	plastid	76.61	35.98
Zm00001d028003_P001	Maize	cytosol	45.97	35.62
CDY10008	Canola	mitochondrion	75.0	35.5
Zm00001d034676_P001	Maize	cytosol	33.06	31.3
Zm00001d020102_P001	Maize	cytosol	38.71	23.88
Zm00001d032569_P001	Maize	plastid	26.61	19.64
KRH55234	Soybean	cytosol	0.81	1.28

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6KJP1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	ProteinID:ONM03148.1	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF884	SMART:SM00173
SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI000844643E	EnsemblPlantsGene:Zm00001d031562	EnsemblPlants:Zm00001d031562_P001	EnsemblPlants:Zm00001d031562_T001	:	:

Description

ras-related protein11G1Ras-related protein RABA6a

Coordinates

chr1:-:194370600..194371395

Molecular Weight (calculated)

13998.4 Da

IEP (calculated)

4.907

GRAVY (calculated)

-0.414

Length

124 amino acids

Sequence
(BLAST)

001: MGDEPDGEAE EYLFKVVIIG DSAVGKSNLL SRYARNEFNP HSKATIGVEF QTQSMAIEGK EVKAQIWDTA GQERFRAVTS AYYRGAFGAL LVYDITRRST
101: FDNVGRWLQE LNMNAYDWYG ARVA

Best Arabidopsis Sequence Match ( AT1G05810.1 )
(BLAST)

001: MSSDDEGREE YLFKIVVIGD SAVGKSNLLS RYARNEFSAN SKATIGVEFQ TQSMEIEGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDITRRTTF
101: ESVGRWLDEL KIHSDTTVAR MLVGNKCDLE NIRAVSVEEG KALAEEEGLF FVETSALDST NVKTAFEMVI LDIYNNVSRK QLNSDTYKDE LTVNRVSLVK
201: DDNSASKQSS GFSCCSST

Arabidopsis Description

ARARAB GTPase homolog A5E [Source:TAIR;Acc:AT1G05810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.