Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048223_P001 | Maize | cytosol | 50.62 | 72.32 |
| GSMUA_Achr2P22260_001 | Banana | cytosol | 43.75 | 67.96 |
| VIT_00s0625g00030.t01 | Wine grape | cytosol | 42.5 | 62.96 |
| Zm00001d012954_P001 | Maize | cytosol | 23.75 | 50.0 |
| Solyc10g050030.1.1 | Tomato | cytosol | 24.38 | 49.37 |
| Zm00001d031562_P001 | Maize | cytosol | 35.62 | 45.97 |
| Zm00001d011095_P001 | Maize | cytosol | 24.38 | 45.88 |
| Zm00001d005612_P001 | Maize | cytosol | 30.62 | 44.14 |
| Zm00001d034676_P001 | Maize | cytosol | 30.62 | 37.4 |
| Bra016699.1-P | Field mustard | cytosol, mitochondrion | 23.12 | 29.6 |
| Zm00001d022251_P002 | Maize | cytosol | 40.0 | 28.83 |
| CDX96853 | Canola | mitochondrion | 23.12 | 24.67 |
| Zm00001d020102_P001 | Maize | cytosol | 30.0 | 23.88 |
| Zm00001d032569_P001 | Maize | plastid | 19.38 | 18.45 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1D6JR75 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | ProteinID:ONL94456.1 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF647 | SMART:SM00175 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0008439B6F | EnsemblPlantsGene:Zm00001d028003 |
| EnsemblPlants:Zm00001d028003_P001 | EnsemblPlants:Zm00001d028003_T001 | SEG:seg | : | : | : |
Description
Ras-related protein RABA6a
Coordinates
chr1:-:19962836..19963318
Molecular Weight (calculated)
17616.2 Da
IEP (calculated)
8.722
GRAVY (calculated)
0.176
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAGDKVDY VFKVVLIGDS AVGKSQILAR FARNEFSLDS KATIGVEFQT RTLVIDHRSV KAQIWDTAGQ ERYHYQQLTH PSASPLCSRS LSAALLARWS
101: LAPIMLLDPF LLRIRSLWTV AVAQTLSAMV DLSACEAFAF SRVHTYLTSR AAQDNVLLGD
101: LAPIMLLDPF LLRIRSLWTV AVAQTLSAMV DLSACEAFAF SRVHTYLTSR AAQDNVLLGD
001: MTSGGGYGDP SQKIDYVFKV VLIGDSAVGK SQILARYARD EFSLDSKATI GVEFQTRTLV IDHKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
Arabidopsis Description
RABA4ARABA4a [Source:UniProtKB/TrEMBL;Acc:A0A178UKD0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.