Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g01620.t01 | Wine grape | cytosol | 61.26 | 78.16 |
| Zm00001d012954_P001 | Maize | cytosol | 42.34 | 61.84 |
| OQU87831 | Sorghum | cytosol | 54.05 | 59.41 |
| KRG93819 | Soybean | cytosol | 50.45 | 58.95 |
| Zm00001d011095_P001 | Maize | cytosol | 44.14 | 57.65 |
| OQU77614 | Sorghum | cytosol | 52.25 | 55.77 |
| Zm00001d048223_P001 | Maize | cytosol | 45.05 | 44.64 |
| GSMUA_Achr7P23610_001 | Banana | cytosol | 63.96 | 40.11 |
| CDY39445 | Canola | cytosol | 77.48 | 39.81 |
| CDX77609 | Canola | cytosol, plasma membrane | 77.48 | 39.81 |
| Bra025060.1-P | Field mustard | cytosol | 77.48 | 39.81 |
| Zm00001d031562_P001 | Maize | cytosol | 44.14 | 39.52 |
| Os01t0667600-01 | Rice | cytosol, golgi, plasma membrane, plastid | 79.28 | 39.29 |
| Bra012576.1-P | Field mustard | cytosol | 75.68 | 39.07 |
| Zm00001d034676_P001 | Maize | cytosol | 45.05 | 38.17 |
| Zm00001d020102_P001 | Maize | cytosol | 67.57 | 37.31 |
| CDY51631 | Canola | cytosol | 31.53 | 34.65 |
| Zm00001d028003_P001 | Maize | cytosol | 44.14 | 30.62 |
| Zm00001d032569_P001 | Maize | plastid | 39.64 | 26.19 |
| Zm00001d022251_P002 | Maize | cytosol | 49.55 | 24.77 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1D6EP43 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | ProteinID:ONM21551.1 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF346 | SMART:SM00175 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000842BFC9 | EnsemblPlantsGene:Zm00001d005612 |
| EnsemblPlants:Zm00001d005612_P001 | EnsemblPlants:Zm00001d005612_T001 | : | : | : | : |
Description
Ras-related protein RABA6a
Coordinates
chr2:-:180671311..180673246
Molecular Weight (calculated)
11978.0 Da
IEP (calculated)
5.183
GRAVY (calculated)
-0.401
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYRAEDDYD YLFKVVLIGD SGVGKSNLLS RFTRNEFSLE SKSTIGVEFA TRSIRVDDKV VKAQIWDTAG QESKKALDIG DDPAAPPRGQ TINVGGKDDV
101: SAVKKAGCCS S
101: SAVKKAGCCS S
001: MAAYRADDEY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN
Arabidopsis Description
RABA1FRas-related protein RABA1f [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.