Factsheet for Zm00001d022251_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97606	Sorghum	cytosol	97.75	97.75
TraesCS2D01G158800.1	Wheat	cytosol	91.89	91.48
HORVU2Hr1G027660.2	Barley	cytosol	91.89	91.48
Os07t0634200-01	Rice	plasma membrane	90.09	90.91
TraesCS2A01G153500.1	Wheat	cytosol	90.99	90.58
GSMUA_Achr6P00700_001	Banana	cytosol	83.78	84.55
TraesCS2B01G178600.1	Wheat	cytosol	89.19	84.26
GSMUA_Achr2P15860_001	Banana	cytosol	84.68	83.93
AT5G47520.1	Thale cress	cytosol	79.73	80.09
CDY25963	Canola	cytosol	78.83	79.91
GSMUA_Achr5P06170_001	Banana	cytosol	60.81	79.88
Bra017482.1-P	Field mustard	cytosol	79.28	79.28
CDY41053	Canola	cytosol	79.28	79.28
CDY40561	Canola	cytosol	78.38	78.73
Bra022136.1-P	Field mustard	cytosol	78.38	78.73
CDX77774	Canola	cytosol	78.38	78.73
KRH34233	Soybean	cytosol	78.83	78.48
CDY28925	Canola	cytosol	77.93	78.28
CDY17729	Canola	cytosol	77.93	78.28
Bra024937.1-P	Field mustard	cytosol	77.48	77.48
KRG92561	Soybean	cytosol	78.83	77.43
PGSC0003DMT400034567	Potato	cytosol	78.38	77.33
PGSC0003DMT400021794	Potato	cytosol	76.13	74.78
Solyc05g054150.2.1	Tomato	cytosol	75.23	73.89
Zm00001d031562_P001	Maize	cytosol	37.84	67.74
Solyc11g012460.1.1	Tomato	plastid	77.03	61.96
Zm00001d012954_P001	Maize	cytosol	18.47	53.95
Zm00001d011095_P001	Maize	cytosol	19.82	51.76
Zm00001d048223_P001	Maize	cytosol	25.23	50.0
Zm00001d005612_P001	Maize	cytosol	24.77	49.55
Zm00001d034676_P001	Maize	cytosol	23.87	40.46
Zm00001d028003_P001	Maize	cytosol	28.83	40.0
Zm00001d020102_P001	Maize	cytosol	22.97	25.37
Zm00001d032569_P001	Maize	plastid	13.96	18.45

Protein Annotations

EntrezGene:100193344	MapMan:22.8.1.1	Gene3D:3.40.50.300	UniProt:B4FEP4	EMBL:BT035582	EMBL:EU960118
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005886	GO:GO:0016020	GO:GO:0016787	ProteinID:ONM59953.1	ProteinID:ONM59954.1	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF430	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI00017B688B	EnsemblPlantsGene:Zm00001d022251	EnsemblPlants:Zm00001d022251_P002	EnsemblPlants:Zm00001d022251_T002	:

Description

Ras-related protein RABA5a

Coordinates

chr7:+:173630340..173633616

Molecular Weight (calculated)

24390.7 Da

IEP (calculated)

6.791

GRAVY (calculated)

-0.288

Length

222 amino acids

Sequence
(BLAST)

001: MANDGDDGQS QDYLFKIVLI GDSSVGKSNL LARFARNEFY PNSKSTIGVE FQTQKLVIDG KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRRQ
101: TFDSVGRWLN ELHNHSDMNV VTILVGNKTD LKHAREVSTA EGQALAEAQG LFFMETSALD SSNVAAAFQT VVKEIYSILS RKVFQSLEQK KSELQSLSSG
201: KAVVLQGEAN QTSSGGRWCC SS

Best Arabidopsis Sequence Match ( AT5G47520.1 )
(BLAST)

001: MAFYSEDDKS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKMDING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRRQ
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S

Arabidopsis Description

RABA5ARas-related protein RABA5a [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.