Factsheet for GSMUA_Achr6P00700_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P15860_001	Banana	cytosol	86.82	85.27
Zm00001d022251_P002	Maize	cytosol	84.55	83.78
EER97606	Sorghum	cytosol	84.09	83.33
Os07t0634200-01	Rice	plasma membrane	82.73	82.73
TraesCS2D01G158800.1	Wheat	cytosol	83.18	82.06
TraesCS2A01G153500.1	Wheat	cytosol	83.18	82.06
HORVU2Hr1G027660.2	Barley	cytosol	82.73	81.61
KRH34233	Soybean	cytosol	78.64	77.58
AT5G47520.1	Thale cress	cytosol	77.73	77.38
GSMUA_Achr5P06170_001	Banana	cytosol	59.09	76.92
PGSC0003DMT400034567	Potato	cytosol	78.64	76.89
KRG92561	Soybean	cytosol	78.64	76.55
TraesCS2B01G178600.1	Wheat	cytosol	81.36	76.17
PGSC0003DMT400021794	Potato	cytosol	78.18	76.11
CDY17729	Canola	cytosol	76.36	76.02
CDY25963	Canola	cytosol	75.45	75.8
Bra024937.1-P	Field mustard	cytosol	76.36	75.68
Solyc05g054150.2.1	Tomato	cytosol	77.73	75.66
Bra017482.1-P	Field mustard	cytosol	75.91	75.23
CDY41053	Canola	cytosol	75.91	75.23
CDY40561	Canola	cytosol	75.45	75.11
CDX77774	Canola	cytosol	75.45	75.11
Bra022136.1-P	Field mustard	cytosol	75.45	75.11
CDY28925	Canola	cytosol	75.0	74.66
GSMUA_Achr2P22260_001	Banana	cytosol	31.82	67.96
GSMUA_Achr8P28380_001	Banana	cytosol	55.45	64.89
GSMUA_Achr2P06080_001	Banana	plasma membrane	62.73	64.49
Solyc11g012460.1.1	Tomato	plastid	79.09	63.04
GSMUA_Achr11P...	Banana	cytosol	61.82	62.96
GSMUA_Achr11P...	Banana	cytosol	60.91	61.75
GSMUA_Achr7P23610_001	Banana	cytosol	41.82	51.98
GSMUA_Achr1P13510_001	Banana	cytosol	20.45	37.19

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G00700_001	EnsemblPlants:GSMUA_Achr6P00700_001	EnsemblPlants:GSMUA_Achr6T00700_001
UniProt:M0T318	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF430	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000294AD4D	:

Description

Ras-related protein ARA-4 [Source:GMGC_GENE;Acc:GSMUA_Achr6G00700_001]

Coordinates

chr6:+:479744..480694

Molecular Weight (calculated)

24322.6 Da

IEP (calculated)

5.097

GRAVY (calculated)

-0.335

Length

220 amino acids

Sequence
(BLAST)

001: MDNNGDEQQN QDYLFKIVMI GDSAVGKSNL LARFARNEFY PNSKSTIGVE FQTQKMQIDG KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LVVYDICRRQ
101: TFDSIGRWLN ELHTHSDMNV VIILVGNKTD LKDAREVGTA EGKALAEAQG LFFIETSALD DSNVAAAFQT LVKEIYHILS RKVFQSQEQK KELSSLGSGN
201: PVVLQGDTND GASTFSCCSS

Best Arabidopsis Sequence Match ( AT5G47520.1 )
(BLAST)

001: MAFYSEDDKS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKMDING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRRQ
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S

Arabidopsis Description

RABA5ARas-related protein RABA5a [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.