Factsheet for GSMUA_Achr2P15860_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P00700_001	Banana	cytosol	85.27	86.82
Os07t0634200-01	Rice	plasma membrane	84.38	85.91
EER97606	Sorghum	cytosol	84.82	85.59
Zm00001d022251_P002	Maize	cytosol	83.93	84.68
HORVU2Hr1G027660.2	Barley	cytosol	83.04	83.41
GSMUA_Achr5P06170_001	Banana	cytosol	62.5	82.84
TraesCS2D01G158800.1	Wheat	cytosol	82.14	82.51
TraesCS2A01G153500.1	Wheat	cytosol	82.14	82.51
AT5G47520.1	Thale cress	cytosol	79.46	80.54
CDY25963	Canola	cytosol	77.68	79.45
CDY17729	Canola	cytosol	78.12	79.19
KRH34233	Soybean	cytosol	78.57	78.92
CDY41053	Canola	cytosol	78.12	78.83
Bra017482.1-P	Field mustard	cytosol	78.12	78.83
PGSC0003DMT400034567	Potato	cytosol	79.02	78.67
Bra024937.1-P	Field mustard	cytosol	77.68	78.38
KRG92561	Soybean	cytosol	79.02	78.32
CDX77774	Canola	cytosol	77.23	78.28
CDY40561	Canola	cytosol	76.34	77.38
Bra022136.1-P	Field mustard	cytosol	76.34	77.38
TraesCS2B01G178600.1	Wheat	cytosol	80.8	77.02
CDY28925	Canola	cytosol	75.89	76.92
PGSC0003DMT400021794	Potato	cytosol	77.23	76.55
Solyc05g054150.2.1	Tomato	cytosol	76.79	76.11
GSMUA_Achr2P22260_001	Banana	cytosol	30.36	66.02
GSMUA_Achr2P06080_001	Banana	plasma membrane	61.61	64.49
GSMUA_Achr8P28380_001	Banana	cytosol	53.57	63.83
Solyc11g012460.1.1	Tomato	plastid	77.68	63.04
GSMUA_Achr11P...	Banana	cytosol	60.27	62.21
GSMUA_Achr11P...	Banana	cytosol	59.82	62.04
GSMUA_Achr7P23610_001	Banana	cytosol	40.18	50.85
GSMUA_Achr1P13510_001	Banana	cytosol	20.09	37.19

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr2G15860_001	EnsemblPlants:GSMUA_Achr2P15860_001	EnsemblPlants:GSMUA_Achr2T15860_001
UniProt:M0S8C7	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF430	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00029572F0	:	:

Description

Ras-related protein ARA-1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G15860_001]

Coordinates

chr2:-:17006227..17007353

Molecular Weight (calculated)

24888.3 Da

IEP (calculated)

5.767

GRAVY (calculated)

-0.333

Length

224 amino acids

Sequence
(BLAST)

001: MDYNGDEDQS QDYLFKIVMI GDSAVGKSNL LARFARNEFY PNSKSTIGVE FQTQKMNIDG KEIKAQIWDT AGQERFKAVT SAYYRGAVGA LVVYDISRRQ
101: TFDSVGRWLN ELHTYSDMNV VTILVGNKTD LKDVREVTTA EGKALAEAQG LFFIETSALD SSNVAAAFQT VVKEIYHILS RKVFLSQEQK KHDMSSLSNG
201: KTVILQGDSN GVSDGARGYW CCSS

Best Arabidopsis Sequence Match ( AT5G47520.1 )
(BLAST)

001: MAFYSEDDKS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKMDING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRRQ
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S

Arabidopsis Description

RABA5ARas-related protein RABA5a [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.