Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022136.1-P | Field mustard | cytosol | 99.55 | 99.55 |
| CDY28925 | Canola | cytosol | 99.09 | 99.09 |
| CDX77774 | Canola | cytosol | 93.21 | 93.21 |
| CDY17729 | Canola | cytosol | 93.21 | 93.21 |
| CDY25963 | Canola | cytosol | 92.31 | 93.15 |
| CDY41053 | Canola | cytosol | 93.21 | 92.79 |
| AT5G47520.1 | Thale cress | cytosol | 92.31 | 92.31 |
| KRH34233 | Soybean | cytosol | 86.88 | 86.1 |
| KRG92561 | Soybean | cytosol | 86.43 | 84.51 |
| PGSC0003DMT400034567 | Potato | cytosol | 81.9 | 80.44 |
| PGSC0003DMT400021794 | Potato | cytosol | 81.0 | 79.2 |
| EER97606 | Sorghum | cytosol | 79.19 | 78.83 |
| Solyc05g054150.2.1 | Tomato | cytosol | 80.54 | 78.76 |
| Zm00001d022251_P002 | Maize | cytosol | 78.73 | 78.38 |
| Os07t0634200-01 | Rice | plasma membrane | 77.83 | 78.18 |
| TraesCS2D01G158800.1 | Wheat | cytosol | 78.28 | 77.58 |
| TraesCS2A01G153500.1 | Wheat | cytosol | 77.38 | 76.68 |
| GSMUA_Achr2P15860_001 | Banana | cytosol | 77.38 | 76.34 |
| HORVU2Hr1G027660.2 | Barley | cytosol | 76.92 | 76.23 |
| GSMUA_Achr6P00700_001 | Banana | cytosol | 75.11 | 75.45 |
| GSMUA_Achr5P06170_001 | Banana | cytosol | 54.75 | 71.6 |
| TraesCS2B01G178600.1 | Wheat | cytosol | 76.02 | 71.49 |
| Solyc11g012460.1.1 | Tomato | plastid | 81.0 | 64.86 |
| CDY17945 | Canola | cytosol | 60.18 | 62.44 |
| CDX83500 | Canola | cytosol | 60.18 | 62.44 |
| CDY42801 | Canola | cytosol | 60.18 | 62.44 |
| CDY70114 | Canola | cytosol | 60.18 | 62.44 |
| CDY55745 | Canola | cytosol | 61.09 | 61.64 |
| CDX84764 | Canola | cytosol | 60.18 | 60.73 |
| CDX79430 | Canola | cytosol | 60.18 | 60.73 |
| CDY54837 | Canola | cytosol | 16.74 | 57.81 |
| CDY06181 | Canola | cytosol | 61.99 | 56.38 |
| CDY39445 | Canola | cytosol | 52.94 | 54.17 |
| CDX77609 | Canola | cytosol, plasma membrane | 52.94 | 54.17 |
| CDY10008 | Canola | mitochondrion | 62.44 | 52.67 |
| CDX96730 | Canola | cytosol | 52.04 | 50.88 |
| CDX83861 | Canola | cytosol | 51.13 | 50.0 |
| CDX83007 | Canola | cytosol | 24.89 | 49.11 |
| CDX72997 | Canola | cytosol | 49.32 | 47.39 |
| CDY51631 | Canola | cytosol | 21.27 | 46.53 |
| CDX96853 | Canola | mitochondrion | 29.86 | 44.0 |
| CDY65720 | Canola | extracellular | 25.34 | 43.08 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078HS92 | UniProt:A0A078HS92 | EnsemblPlants:CDY40561 | ProteinID:CDY40561 |
| ProteinID:CDY40561.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00069888001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF430 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00006C603B |
Description
BnaC02g33310DBnaC02g33310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HS92]
Coordinates
chrLK032474:+:105436..107613
Molecular Weight (calculated)
24309.8 Da
IEP (calculated)
6.544
GRAVY (calculated)
-0.253
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFYSEDNKS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKIVING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRVQ
101: TFQSIGRWLN ELHTHSDMNV VTILVGNKSD LKDIREVPTS EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMTSQELN KQDPASLSNG
201: KKVVIPSEGE SKTGGGGCCS R
101: TFQSIGRWLN ELHTHSDMNV VTILVGNKSD LKDIREVPTS EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMTSQELN KQDPASLSNG
201: KKVVIPSEGE SKTGGGGCCS R
001: MAFYSEDDKS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKMDING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRRQ
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S
Arabidopsis Description
RABA5ARas-related protein RABA5a [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.