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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016699.1-P Field mustard cytosol, mitochondrion 76.0 91.2
Solyc10g050030.1.1 Tomato cytosol 22.0 41.77
GSMUA_Achr2P22260_001 Banana cytosol 28.0 40.78
CDX77609 Canola cytosol, plasma membrane 55.33 38.43
CDY39445 Canola cytosol 55.33 38.43
VIT_00s0625g00030.t01 Wine grape cytosol 24.0 33.33
CDY54837 Canola cytosol 13.33 31.25
CDY25963 Canola cytosol 44.0 30.14
CDX77774 Canola cytosol 44.0 29.86
CDY40561 Canola cytosol 44.0 29.86
CDY17729 Canola cytosol 44.0 29.86
CDY41053 Canola cytosol 44.0 29.73
CDY51631 Canola cytosol 20.0 29.7
CDY28925 Canola cytosol 43.33 29.41
CDX72997 Canola cytosol 43.33 28.26
CDY17945 Canola cytosol 39.33 27.7
CDY70114 Canola cytosol 39.33 27.7
Zm00001d048223_P001 Maize cytosol 20.67 27.68
CDX96730 Canola cytosol 41.33 27.43
CDX83500 Canola cytosol 38.67 27.23
CDX83007 Canola cytosol 20.0 26.79
CDY42801 Canola cytosol 38.0 26.76
CDX83861 Canola cytosol 40.0 26.55
CDX84764 Canola cytosol 37.33 25.57
CDX79430 Canola cytosol 37.33 25.57
CDY55745 Canola cytosol 36.67 25.11
CDY06181 Canola cytosol 39.33 24.28
Zm00001d028003_P001 Maize cytosol 24.67 23.12
CDY10008 Canola mitochondrion 39.33 22.52
CDY65720 Canola extracellular 12.67 14.62
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1GO:A0A078EBT7EnsemblPlants:CDX96853ProteinID:CDX96853ProteinID:CDX96853.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00103094001InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449PFscan:PS51419
PANTHER:PTHR24073PANTHER:PTHR24073:SF592SMART:SM00175SUPFAM:SSF52540InterPro:Small_GTPaseUniParc:UPI0004EDF38B
SEG:seg:::::
Description
BnaA08g23960D
Coordinates
chrLK031895:+:1257955..1258794
Molecular Weight (calculated)
17273.5 Da
IEP (calculated)
9.613
GRAVY (calculated)
-0.467
Length
150 amino acids
Sequence
(BLAST)
001: MALIVEGKSV KRLSKFLQSP TRSTDQQSRS HFIIKDYHQQ SRKLLHHFGE FISNLSLHLH THLSLSTIGV EFATQNLKVD EKVIKAQIWD TAGQERYRAF
101: TSAYYRGAFE NNHTYPNIVV MLVGNKSDLR HLLAVPTEDG KSYAEQESLW
Best Arabidopsis Sequence Match ( AT1G16920.1 )
(BLAST)
001: MAGYRVEDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATRTLKVDGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRRAT
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN
Arabidopsis Description
RABA1BRABA1b [Source:UniProtKB/TrEMBL;Acc:A0A178WJV5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.