CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005650.1-P	Field mustard	cytosol	100.0	100.0
AT2G31680.1	Thale cress	cytosol	94.06	94.06
CDX79430	Canola	cytosol	91.78	91.78
CDX84764	Canola	cytosol	91.78	91.78
CDX83500	Canola	cytosol	83.11	85.45
CDY42801	Canola	cytosol	82.65	84.98
CDY17945	Canola	cytosol	80.82	83.1
CDY70114	Canola	cytosol	80.37	82.63
Solyc09g097900.2.1	Tomato	cytosol	76.71	77.78
PGSC0003DMT400042789	Potato	cytosol	76.26	77.31
CDY65720	Canola	extracellular	45.66	76.92
Zm00001d031562_P001	Maize	cytosol	43.38	76.61
CDY06181	Canola	cytosol	84.47	76.13
GSMUA_Achr11P...	Banana	cytosol	74.89	75.93
TraesCS7A01G256000.1	Wheat	cytosol	74.89	75.58
TraesCS7D01G254400.1	Wheat	cytosol	74.89	75.58
TraesCS7B01G152600.1	Wheat	cytosol	74.43	75.12
Os08t0525000-01	Rice	plasma membrane	73.52	74.54
HORVU7Hr1G052840.3	Barley	cytosol	74.43	74.43
OQU80857	Sorghum	cytosol	73.06	74.07
GSMUA_Achr11P...	Banana	cytosol	71.69	72.35
CDY10008	Canola	mitochondrion	84.47	70.61
KRH55234	Soybean	cytosol	22.83	64.1
CDY17729	Canola	cytosol	62.56	61.99
CDX77774	Canola	cytosol	62.56	61.99
CDY25963	Canola	cytosol	61.64	61.64
CDY41053	Canola	cytosol	62.1	61.26
CDY40561	Canola	cytosol	61.64	61.09
CDY28925	Canola	cytosol	61.19	60.63
CDY54837	Canola	cytosol	15.07	51.56
CDY39445	Canola	cytosol	48.86	49.54
CDX77609	Canola	cytosol, plasma membrane	48.86	49.54
CDX96730	Canola	cytosol	48.4	46.9
CDX83861	Canola	cytosol	47.95	46.46
CDX83007	Canola	cytosol	22.83	44.64
CDX72997	Canola	cytosol	46.58	44.35
CDY51631	Canola	cytosol	19.63	42.57
CDX96853	Canola	mitochondrion	25.11	36.67

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:A0A078J1I4	UniProt:A0A078J1I4	EnsemblPlants:CDY55745	ProteinID:CDY55745
ProteinID:CDY55745.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00017308001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF884	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00025478DE

Description

BnaA05g35310DBnaA05g35310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1I4]

Coordinates

chrLK033426:+:7675..14108

Molecular Weight (calculated)

24337.5 Da

IEP (calculated)

5.155

GRAVY (calculated)

-0.384

Length

219 amino acids

Sequence
(BLAST)

001: MSSDDEGGEE YLFKIVIIGD SAVGKSNLLS RYARNEFNAH SKATIGVEFQ TQSMEIEGKE VRAQIWDTAG QERFRAVTSA YYRGAVGAFV VYDISRRTTF
101: ESVGRWLDEL KTHSDTTVAR MLVGNKCDLE SMRAVSVEEG KALAETQGLF FMETSALDST NVKTAFEMVI RDIYTNISRK QLNSDTYKTQ LGSNNRVSLV
201: KDDNKGSSQV FGFSCCSSS

Best Arabidopsis Sequence Match ( AT2G31680.1 )
(BLAST)

001: MSSDDEGGEE YLFKIVIIGD SAVGKSNLLS RYARNEFNAH SKATIGVEFQ TQNMEIEGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDISRRSTF
101: ESVGRWLDEL KTHSDTTVAR MLVGNKCDLE SIRAVSVEEG KALAETEGLF FMETSALDST NVKTAFEMVI RDIYTNISRK QLNSDTYKTE LSMKNRVSLV
201: KDDNKSSTQG FGFSCCSSS

Arabidopsis Description

RABA5DRas-related protein RABA5d [Source:UniProtKB/Swiss-Prot;Acc:Q9SIP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.