Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032453.1-P | Field mustard | cytosol | 82.44 | 99.08 |
| CDY06181 | Canola | cytosol | 91.6 | 98.77 |
| CDY55745 | Canola | cytosol | 70.61 | 84.47 |
| CDX79430 | Canola | cytosol | 70.61 | 84.47 |
| CDX84764 | Canola | cytosol | 70.23 | 84.02 |
| CDX83500 | Canola | cytosol | 67.18 | 82.63 |
| CDY42801 | Canola | cytosol | 66.79 | 82.16 |
| AT1G05810.2 | Thale cress | plastid | 82.06 | 81.44 |
| CDY17945 | Canola | cytosol | 65.65 | 80.75 |
| CDY70114 | Canola | cytosol | 65.27 | 80.28 |
| Solyc09g097900.2.1 | Tomato | cytosol | 63.36 | 76.85 |
| PGSC0003DMT400042789 | Potato | cytosol | 62.98 | 76.39 |
| OQU80857 | Sorghum | cytosol | 62.98 | 76.39 |
| TraesCS7D01G254400.1 | Wheat | cytosol | 62.98 | 76.04 |
| Os08t0525000-01 | Rice | plasma membrane | 62.6 | 75.93 |
| TraesCS7A01G256000.1 | Wheat | cytosol | 62.6 | 75.58 |
| GSMUA_Achr11P... | Banana | cytosol | 62.21 | 75.46 |
| TraesCS7B01G152600.1 | Wheat | cytosol | 62.21 | 75.12 |
| Zm00001d031562_P001 | Maize | cytosol | 35.5 | 75.0 |
| HORVU7Hr1G052840.3 | Barley | cytosol | 62.6 | 74.89 |
| GSMUA_Achr11P... | Banana | cytosol | 61.45 | 74.19 |
| CDY65720 | Canola | extracellular | 32.82 | 66.15 |
| KRH55234 | Soybean | cytosol | 19.47 | 65.38 |
| CDX77774 | Canola | cytosol | 53.44 | 63.35 |
| CDY17729 | Canola | cytosol | 53.44 | 63.35 |
| CDY25963 | Canola | cytosol | 52.67 | 63.01 |
| CDY41053 | Canola | cytosol | 53.05 | 62.61 |
| CDY40561 | Canola | cytosol | 52.67 | 62.44 |
| CDY28925 | Canola | cytosol | 52.29 | 61.99 |
| CDY54837 | Canola | cytosol | 12.98 | 53.12 |
| CDY39445 | Canola | cytosol | 43.13 | 52.31 |
| CDX77609 | Canola | cytosol, plasma membrane | 43.13 | 52.31 |
| CDX96730 | Canola | cytosol | 41.98 | 48.67 |
| CDX83861 | Canola | cytosol | 41.6 | 48.23 |
| CDY51631 | Canola | cytosol | 18.32 | 47.52 |
| CDX72997 | Canola | cytosol | 40.84 | 46.52 |
| CDX83007 | Canola | cytosol | 19.47 | 45.54 |
| CDX96853 | Canola | mitochondrion | 22.52 | 39.33 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078FD85 | UniProt:A0A078FD85 | EnsemblPlants:CDY10008 | ProteinID:CDY10008 |
| ProteinID:CDY10008.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00031789001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF884 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EDEC96 |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g44430DBnaC08g44430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD85]
Coordinates
chrLK032000:-:454945..456500
Molecular Weight (calculated)
29303.9 Da
IEP (calculated)
5.923
GRAVY (calculated)
-0.222
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MILRRALNAQ YVLLPACCTV HRLLSLKPLI LLSLETRTER GAMTMYSDDE GREEYLFKIV VIGDSAVGKS NLLSRYARNE FSANSKATIG VEFQTQSMDI
101: DGKEVKAQIW DTAGQERFRA VTSAYYRGAV GALVVYDISR RMTFESVGRW LDELKIHSDT TVARMLVGNK CDLENIRAVS VEEGKDLAEA QGLFFVETSA
201: LDSTNVRIAF EKVILDIYNN VSRKQLNSDT YKDKLTVSRV SLVKDDDNTD SKQSSGFSCC SS
101: DGKEVKAQIW DTAGQERFRA VTSAYYRGAV GALVVYDISR RMTFESVGRW LDELKIHSDT TVARMLVGNK CDLENIRAVS VEEGKDLAEA QGLFFVETSA
201: LDSTNVRIAF EKVILDIYNN VSRKQLNSDT YKDKLTVSRV SLVKDDDNTD SKQSSGFSCC SS
001: MRSMSSCASL LHRLPSPPLS LSLSLQTSPT SLSRNLGKKK KTVKRAMSSD DEGREEYLFK IVVIGDSAVG KSNLLSRYAR NEFSANSKAT IGVEFQTQSM
101: EIEGKEVKAQ IWDTAGQERF RAVTSAYYRG AVGALVVYDI TRRTTFESVG RWLDELKIHS DTTVARMLVG NKCDLENIRA VSVEEGKALA EEEGLFFVET
201: SALDSTNVKT AFEMVILDIY NNVSRKQLNS DTYKDELTVN RVSLVKDDNS ASKQSSGFSC CSST
101: EIEGKEVKAQ IWDTAGQERF RAVTSAYYRG AVGALVVYDI TRRTTFESVG RWLDELKIHS DTTVARMLVG NKCDLENIRA VSVEEGKALA EEEGLFFVET
201: SALDSTNVKT AFEMVILDIY NNVSRKQLNS DTYKDELTVN RVSLVKDDNS ASKQSSGFSC CSST
Arabidopsis Description
ARARAB GTPase homolog A5E [Source:TAIR;Acc:AT1G05810]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.