Factsheet for Bra032453.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06181	Canola	cytosol	99.54	89.3
Bra005650.1-P	Field mustard	cytosol	84.4	84.02
Bra022861.1-P	Field mustard	cytosol	83.94	83.94
Bra000290.1-P	Field mustard	cytosol	80.73	82.63
CDY10008	Canola	mitochondrion	99.08	82.44
Bra004747.1-P	Field mustard	cytosol	78.9	80.75
Solyc09g097900.2.1	Tomato	cytosol	75.69	76.39
OQU80857	Sorghum	cytosol	75.69	76.39
AT1G05810.2	Thale cress	plastid	92.2	76.14
TraesCS7D01G254400.1	Wheat	cytosol	75.69	76.04
PGSC0003DMT400042789	Potato	cytosol	75.23	75.93
Os08t0525000-01	Rice	plasma membrane	75.23	75.93
TraesCS7A01G256000.1	Wheat	cytosol	75.23	75.58
GSMUA_Achr11P...	Banana	cytosol	74.77	75.46
TraesCS7B01G152600.1	Wheat	cytosol	74.77	75.12
Zm00001d031562_P001	Maize	cytosol	42.66	75.0
HORVU7Hr1G052840.3	Barley	cytosol	75.23	74.89
GSMUA_Achr11P...	Banana	cytosol	73.39	73.73
Bra040376.1-P	Field mustard	cytosol	72.02	73.71
KRH55234	Soybean	cytosol	23.39	65.38
Bra024937.1-P	Field mustard	cytosol	63.3	62.16
Bra017482.1-P	Field mustard	cytosol	63.3	62.16
Bra022136.1-P	Field mustard	cytosol	62.84	61.99
Bra012576.1-P	Field mustard	cytosol	51.38	52.09
Bra025060.1-P	Field mustard	cytosol	51.38	51.85
Bra016565.1-P	Field mustard	cytosol	50.92	49.12
Bra015978.1-P	Field mustard	cytosol	49.08	46.12
Bra016699.1-P	Field mustard	cytosol, mitochondrion	20.18	35.2

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra032453	EnsemblPlants:Bra032453.1	EnsemblPlants:Bra032453.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4EUH1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF884	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000254352C	:	:

Description

AT1G05810 (E=3e-109) ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RABA5E (RAB GTPASE HOMOLOG A5E); GTP binding

Coordinates

chrA09:-:36135323..36136568

Molecular Weight (calculated)

24323.5 Da

IEP (calculated)

4.863

GRAVY (calculated)

-0.361

Length

218 amino acids

Sequence
(BLAST)

001: MYSDDEGREE YLFKIVVIGD SAVGKSNLLS RYARNEFSAN SKATIGVEFQ TQSMDIDGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDISRRMTF
101: ESVGRWLDEL KIHSDTTVAR MLVGNKCDLE NIRAVSVEEG KSLAEAQGLF FVETSALDST NVRIAFEKVI LDIYNNVSRK QLNSDTYKDK LTVSRVSLVK
201: DDDNTDPKQS SGFSCCSS

Best Arabidopsis Sequence Match ( AT1G05810.2 )
(BLAST)

001: MRSMSSCASL LHRLPSPPLS LSLSLQTSPT SLSRNLGKKK KTVKRAMSSD DEGREEYLFK IVVIGDSAVG KSNLLSRYAR NEFSANSKAT IGVEFQTQSM
101: EIEGKEVKAQ IWDTAGQERF RAVTSAYYRG AVGALVVYDI TRRTTFESVG RWLDELKIHS DTTVARMLVG NKCDLENIRA VSVEEGKALA EEEGLFFVET
201: SALDSTNVKT AFEMVILDIY NNVSRKQLNS DTYKDELTVN RVSLVKDDNS ASKQSSGFSC CSST

Arabidopsis Description

ARARAB GTPase homolog A5E [Source:TAIR;Acc:AT1G05810]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.