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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 5
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40561 Canola cytosol 99.55 99.55
CDY28925 Canola cytosol 99.55 99.55
Bra017482.1-P Field mustard cytosol 93.67 93.24
Bra024937.1-P Field mustard cytosol 93.67 93.24
AT5G47520.1 Thale cress cytosol 92.76 92.76
KRH34233 Soybean cytosol 86.88 86.1
KRG92561 Soybean cytosol 86.43 84.51
PGSC0003DMT400034567 Potato cytosol 81.9 80.44
PGSC0003DMT400021794 Potato cytosol 81.0 79.2
EER97606 Sorghum cytosol 79.19 78.83
Solyc05g054150.2.1 Tomato cytosol 80.54 78.76
Zm00001d022251_P002 Maize cytosol 78.73 78.38
Os07t0634200-01 Rice plasma membrane 77.83 78.18
TraesCS2D01G158800.1 Wheat cytosol 78.28 77.58
TraesCS2A01G153500.1 Wheat cytosol 77.38 76.68
GSMUA_Achr2P15860_001 Banana cytosol 77.38 76.34
HORVU2Hr1G027660.2 Barley cytosol 76.92 76.23
GSMUA_Achr6P00700_001 Banana cytosol 75.11 75.45
GSMUA_Achr5P06170_001 Banana cytosol 54.75 71.6
TraesCS2B01G178600.1 Wheat cytosol 76.02 71.49
Solyc11g012460.1.1 Tomato plastid 81.0 64.86
Bra040376.1-P Field mustard cytosol 61.54 63.85
Bra000290.1-P Field mustard cytosol 60.63 62.91
Bra032453.1-P Field mustard cytosol 61.99 62.84
Bra004747.1-P Field mustard cytosol 60.18 62.44
Bra005650.1-P Field mustard cytosol 61.09 61.64
Bra022861.1-P Field mustard cytosol 59.73 60.55
Bra025060.1-P Field mustard cytosol 52.94 54.17
Bra012576.1-P Field mustard cytosol 51.13 52.56
Bra016565.1-P Field mustard cytosol 52.04 50.88
Bra015978.1-P Field mustard cytosol 49.32 46.98
Bra016699.1-P Field mustard cytosol, mitochondrion 22.62 40.0
Protein Annotations
MapMan:22.8.1.1Gene3D:3.40.50.300EnsemblPlantsGene:Bra022136EnsemblPlants:Bra022136.1EnsemblPlants:Bra022136.1-PGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787
UniProt:M4E039InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449PFscan:PS51419PANTHER:PTHR24073
PANTHER:PTHR24073:SF430SMART:SM00173SMART:SM00174SMART:SM00175SMART:SM00176SUPFAM:SSF52540
InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231UniParc:UPI00025462FF::
Description
AT5G47520 (E=1e-112) AtRABA5a | AtRABA5a (Arabidopsis Rab GTPase homolog A5a); GTP binding
Coordinates
chrA02:-:19629225..19629973
Molecular Weight (calculated)
24295.8 Da
IEP (calculated)
6.544
GRAVY (calculated)
-0.254
Length
221 amino acids
Sequence
(BLAST)
001: MAFYSEDNKS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKIVING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRVQ
101: TFQSIGRWLN ELHTHSDMNV VTILVGNKSD LKDIREVPTS EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSEGE SKTGGGGCCS R
Best Arabidopsis Sequence Match ( AT5G47520.1 )
(BLAST)
001: MAFYSEDDKS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKMDING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRRQ
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S
Arabidopsis Description
RABA5ARas-related protein RABA5a [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.