Factsheet for HORVU2Hr1G027660.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G153500.1	Wheat	cytosol	97.76	97.76
TraesCS2D01G158800.1	Wheat	cytosol	97.31	97.31
EER97606	Sorghum	cytosol	92.38	92.79
Zm00001d022251_P002	Maize	cytosol	91.48	91.89
Os07t0634200-01	Rice	plasma membrane	90.13	91.36
TraesCS2B01G178600.1	Wheat	cytosol	95.52	90.64
GSMUA_Achr2P15860_001	Banana	cytosol	83.41	83.04
GSMUA_Achr6P00700_001	Banana	cytosol	81.61	82.73
GSMUA_Achr5P06170_001	Banana	cytosol	60.09	79.29
AT5G47520.1	Thale cress	cytosol	78.48	79.19
CDY25963	Canola	cytosol	76.68	78.08
CDY41053	Canola	cytosol	77.13	77.48
Bra017482.1-P	Field mustard	cytosol	77.13	77.48
CDY17729	Canola	cytosol	76.68	77.38
CDX77774	Canola	cytosol	76.23	76.92
Bra022136.1-P	Field mustard	cytosol	76.23	76.92
CDY40561	Canola	cytosol	76.23	76.92
KRH34233	Soybean	cytosol	76.68	76.68
Bra024937.1-P	Field mustard	cytosol	76.23	76.58
CDY28925	Canola	cytosol	75.78	76.47
PGSC0003DMT400034567	Potato	cytosol	76.68	76.0
KRG92561	Soybean	cytosol	76.68	75.66
PGSC0003DMT400021794	Potato	cytosol	75.34	74.34
Solyc05g054150.2.1	Tomato	cytosol	74.89	73.89
HORVU7Hr1G052840.3	Barley	cytosol	60.99	62.1
Solyc11g012460.1.1	Tomato	plastid	76.23	61.59

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EMBL:AK360217	EMBL:AK367956	UniProt:F2D8K5	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886
GO:GO:0016020	GO:GO:0016787	EnsemblPlantsGene:HORVU2Hr1G027660	EnsemblPlants:HORVU2Hr1G027660.2	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF430	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI0002005907	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D8K5]

Coordinates

chrchr2H:+:92179750..92183423

Molecular Weight (calculated)

24532.9 Da

IEP (calculated)

8.199

GRAVY (calculated)

-0.271

Length

223 amino acids

Sequence
(BLAST)

001: MAYGGDEQQS QDYLFKIVLL GDSSVGKSNL LARFARNEFF PNSKSTIGVE FQTQKLVIDG KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDITRRQ
101: TFDSVGRWLN ELHAHSDMNV VTILIGNKTD LKHAREVSPA EGKALAEAQG LFFMETSALD SSNVTAAFQT VVKEIYSILS RKVFQSQEQK KSELQSLSNG
201: KAVVLQSDAP SATSSGGRWC CSS

Best Arabidopsis Sequence Match ( AT5G47520.1 )
(BLAST)

001: MAFYSEDDKS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKMDING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRRQ
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S

Arabidopsis Description

RABA5ARas-related protein RABA5a [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.