Factsheet for HORVU7Hr1G052840.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G152600.1	Wheat	cytosol	97.72	98.62
TraesCS7A01G256000.1	Wheat	cytosol	97.72	98.62
TraesCS7D01G254400.1	Wheat	cytosol	96.8	97.7
OQU80857	Sorghum	cytosol	93.15	94.44
Os08t0525000-01	Rice	plasma membrane	91.32	92.59
Zm00001d031562_P001	Maize	cytosol	49.77	87.9
GSMUA_Achr11P...	Banana	cytosol	79.45	80.56
Solyc09g097900.2.1	Tomato	cytosol	78.08	79.17
PGSC0003DMT400042789	Potato	cytosol	78.08	79.17
GSMUA_Achr11P...	Banana	cytosol	78.08	78.8
AT2G43130.1	Thale cress	cytosol	76.26	78.04
CDY42801	Canola	cytosol	75.8	77.93
Bra000290.1-P	Field mustard	cytosol	75.8	77.93
CDX83500	Canola	cytosol	75.8	77.93
CDY17945	Canola	cytosol	74.43	76.53
AT2G31680.1	Thale cress	cytosol	76.26	76.26
CDY70114	Canola	cytosol	73.97	76.06
Bra004747.1-P	Field mustard	cytosol	73.97	76.06
CDX79430	Canola	cytosol	75.34	75.34
Bra032453.1-P	Field mustard	cytosol	74.89	75.23
Bra022861.1-P	Field mustard	cytosol	74.43	74.77
CDX84764	Canola	cytosol	74.43	74.43
CDY55745	Canola	cytosol	74.43	74.43
Bra005650.1-P	Field mustard	cytosol	74.43	74.43
CDY06181	Canola	cytosol	74.89	67.49
AT1G05810.2	Thale cress	plastid	75.8	62.88
CDY10008	Canola	mitochondrion	74.89	62.6
KRH55234	Soybean	cytosol	21.92	61.54
HORVU2Hr1G027660.2	Barley	cytosol	62.1	60.99

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EMBL:AK354200	UniProt:F2CRE8	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:HORVU7Hr1G052840
EnsemblPlants:HORVU7Hr1G052840.3	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF884	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002004661	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CRE8]

Coordinates

chrchr7H:+:203793325..203796553

Molecular Weight (calculated)

24319.4 Da

IEP (calculated)

4.537

GRAVY (calculated)

-0.409

Length

219 amino acids

Sequence
(BLAST)

001: MGMGDDSDGE AEEYLFKVVI IGDSAVGKSN LLSRYARNEF NLHSKATIGV EFQTQSMDID GKEVKAQIWD TAGQERFRAV TSAYYRGAFG ALLVYDISRR
101: GTFDNVGRWL QELNTHSDTT VAKMLVGNKC DLDNIREVPV EEGKALAESE GLFFMETSAL DSTNVNTAFE LVIKEIYNSV SRKILNSDSY KAELSLNRVS
201: IDDSDSKDGQ KQTSRFGCC

Best Arabidopsis Sequence Match ( AT2G43130.1 )
(BLAST)

001: MSDDDERGEE YLFKIVIIGD SAVGKSNLLT RYARNEFNPN SKATIGVEFQ TQSMLIDGKE VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDITRSSTF
101: ENVGRWLDEL NTHSDTTVAK MLIGNKCDLE SIRAVSVEEG KSLAESEGLF FMETSALDST NVKTAFEMVI REIYSNISRK QLNSDSYKEE LTVNRVSLVK
201: NENEGTKTFS CCSR

Arabidopsis Description

RABA5CRas-related protein RABA5c [Source:UniProtKB/Swiss-Prot;Acc:P28187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.