Factsheet for Os07t0634200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97606	Sorghum	cytosol	92.73	91.89
HORVU2Hr1G027660.2	Barley	cytosol	91.36	90.13
Zm00001d022251_P002	Maize	cytosol	90.91	90.09
TraesCS2D01G158800.1	Wheat	cytosol	90.91	89.69
TraesCS2A01G153500.1	Wheat	cytosol	90.91	89.69
GSMUA_Achr2P15860_001	Banana	cytosol	85.91	84.38
GSMUA_Achr6P00700_001	Banana	cytosol	82.73	82.73
TraesCS2B01G178600.1	Wheat	cytosol	88.18	82.55
AT5G47520.1	Thale cress	cytosol	80.45	80.09
GSMUA_Achr5P06170_001	Banana	cytosol	60.45	78.7
CDY25963	Canola	cytosol	78.18	78.54
CDY17729	Canola	cytosol	78.64	78.28
CDY41053	Canola	cytosol	78.64	77.93
Bra017482.1-P	Field mustard	cytosol	78.64	77.93
CDX77774	Canola	cytosol	78.18	77.83
Bra022136.1-P	Field mustard	cytosol	78.18	77.83
CDY40561	Canola	cytosol	78.18	77.83
PGSC0003DMT400034567	Potato	cytosol	79.55	77.78
KRH34233	Soybean	cytosol	78.64	77.58
Bra024937.1-P	Field mustard	cytosol	78.18	77.48
CDY28925	Canola	cytosol	77.73	77.38
KRG92561	Soybean	cytosol	78.64	76.55
PGSC0003DMT400021794	Potato	cytosol	77.73	75.66
Solyc05g054150.2.1	Tomato	cytosol	77.73	75.66
Os05t0280200-01	Rice	plasma membrane	31.82	68.63
Os08t0525000-01	Rice	plasma membrane	61.36	62.5
Solyc11g012460.1.1	Tomato	plastid	77.27	61.59
Os01t0667600-01	Rice	cytosol, golgi, plasma membrane, plastid	51.36	50.45

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EntrezGene:4344016	EMBL:AK102491	ProteinID:BAC07118.1	ProteinID:BAF22293.1
ProteinID:BAT02802.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0005886	GO:GO:0016020	GO:GO:0016787	EnsemblPlantsGene:Os07g0634200	EnsemblPlants:Os07t0634200-01
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF430
UniProt:Q8LHP5	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00000A9A30	RefSeq:XP_015647267.1	:

Description

small GTP-binding protein OsRab11G1Similar to Rab GTP-binding protein Rab11a. (Os07t0634200-01)

Coordinates

chr7:+:26321294..26324120

Molecular Weight (calculated)

24486.7 Da

IEP (calculated)

5.782

GRAVY (calculated)

-0.414

Length

220 amino acids

Sequence
(BLAST)

001: MAYDGDEEQS QDYLFKIVLL GDSSVGKSNL LARFARNEFY PNSKSTIGVE FQTQKLVIDG KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRRQ
101: TFDSVGRWLN ELHTHSDMNV VTILVGNKTD LKHAREVSTA EGKALAESQG LFFMETSALD SSNVAEAFQT VVKEIYGILS RKVFQSQEQK RSEQSLSNGK
201: PVMLSDSNEP TSGGRWCCSS

Best Arabidopsis Sequence Match ( AT5G47520.1 )
(BLAST)

001: MAFYSEDDKS EDYLFKIVLI GDSAVGKSNL LARFARDEFY PNSKSTIGVE FQTQKMDING KEIKAQIWDT AGQERFRAVT SAYYRGAVGA LLVYDISRRQ
101: TFHSIGRWLN ELHTHSDMNV VTILVGNKSD LKDLREVSTA EGKALAEAQG LFFMETSALD SSNVAAAFET VVKEIYNILS RKVMSSQELN KQDPASLSNG
201: KKVVIPSDGQ GEFKKGGCCS S

Arabidopsis Description

RABA5ARas-related protein RABA5a [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.