Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54837 | Canola | cytosol | 41.96 | 73.44 |
| Zm00001d012954_P001 | Maize | cytosol | 40.18 | 59.21 |
| Zm00001d011095_P001 | Maize | cytosol | 35.71 | 47.06 |
| Zm00001d034676_P001 | Maize | cytosol | 47.32 | 40.46 |
| GSMUA_Achr7P23610_001 | Banana | cytosol | 50.0 | 31.64 |
| CDX77609 | Canola | cytosol, plasma membrane | 53.57 | 27.78 |
| CDY39445 | Canola | cytosol | 53.57 | 27.78 |
| CDY51631 | Canola | cytosol | 24.11 | 26.73 |
| CDY17729 | Canola | cytosol | 50.0 | 25.34 |
| CDY41053 | Canola | cytosol | 50.0 | 25.23 |
| CDX77774 | Canola | cytosol | 49.11 | 24.89 |
| CDY28925 | Canola | cytosol | 49.11 | 24.89 |
| CDY40561 | Canola | cytosol | 49.11 | 24.89 |
| CDY25963 | Canola | cytosol | 48.21 | 24.66 |
| CDX83500 | Canola | cytosol | 44.64 | 23.47 |
| CDY42801 | Canola | cytosol | 44.64 | 23.47 |
| CDX79430 | Canola | cytosol | 45.54 | 23.29 |
| CDX84764 | Canola | cytosol | 45.54 | 23.29 |
| CDX96730 | Canola | cytosol | 46.43 | 23.01 |
| CDX83861 | Canola | cytosol | 46.43 | 23.01 |
| CDY17945 | Canola | cytosol | 43.75 | 23.0 |
| CDY70114 | Canola | cytosol | 43.75 | 23.0 |
| CDY55745 | Canola | cytosol | 44.64 | 22.83 |
| CDX72997 | Canola | cytosol | 43.75 | 21.3 |
| CDY06181 | Canola | cytosol | 45.54 | 20.99 |
| CDX96853 | Canola | mitochondrion | 26.79 | 20.0 |
| CDY10008 | Canola | mitochondrion | 45.54 | 19.47 |
| CDY65720 | Canola | extracellular | 8.93 | 7.69 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078D1L5 | EnsemblPlants:CDX83007 | ProteinID:CDX83007 | ProteinID:CDX83007.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00138452001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF495 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI0004EE9E26 | SEG:seg | : | : | : |
Description
BnaA01g20070D
Coordinates
chrLK031831:-:385696..386423
Molecular Weight (calculated)
12114.3 Da
IEP (calculated)
7.346
GRAVY (calculated)
-0.261
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHRVDQEYN YLFKIVLIGD SGVSKSNILS RFTRNEFCLE SKSIIGVEFT TITTQVEGKT IKAQIWHTAG QESKKALAAQ EAAAANSAIP GQGTTINVDD
101: TSEGVKRGCC ST
101: TSEGVKRGCC ST
001: MTHRVDQEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTTQVEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS
Arabidopsis Description
RABA2CRas-related protein RABA2c [Source:UniProtKB/Swiss-Prot;Acc:Q96283]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.