Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- cytosol 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P22260_001 | Banana | cytosol | 64.56 | 49.51 |
| Zm00001d048223_P001 | Maize | cytosol | 45.57 | 32.14 |
| VIT_00s0625g00030.t01 | Wine grape | cytosol | 41.77 | 30.56 |
| Bra016699.1-P | Field mustard | cytosol, mitochondrion | 41.77 | 26.4 |
| Zm00001d028003_P001 | Maize | cytosol | 49.37 | 24.38 |
| CDX96853 | Canola | mitochondrion | 41.77 | 22.0 |
| Solyc09g056340.2.1 | Tomato | cytosol | 54.43 | 20.48 |
| Solyc09g098170.2.1 | Tomato | plastid | 55.7 | 20.28 |
| Solyc09g097900.2.1 | Tomato | cytosol | 53.16 | 19.44 |
| Solyc05g054150.2.1 | Tomato | cytosol | 54.43 | 19.03 |
| Solyc03g118820.2.1 | Tomato | plastid | 54.43 | 17.77 |
| Solyc11g012460.1.1 | Tomato | plastid | 55.7 | 15.94 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005768 | GO:GO:0005794 | GO:GO:0016787 | UniProt:K4D0F9 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF863 | SMART:SM00175 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | EnsemblPlantsGene:Solyc10g050030.1 | EnsemblPlants:Solyc10g050030.1.1 | TIGRFAMs:TIGR00231 | UniParc:UPI000276A227 |
Description
No Description!
Coordinates
chr10:+:47634900..47636259
Molecular Weight (calculated)
9299.1 Da
IEP (calculated)
9.998
GRAVY (calculated)
-0.601
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MYELVNSQLW ARFSRNKFSL DSKPTIQVEF QTKTLHVDNK TIKSQTWDTA GQEMYRAVTN AYYRGVVGTM LVYDLTKRQ
001: MSNLYGDYNQ KIDYVFKVVL IGDSAVGKTQ LLARFARNEF SVDSKATIGV EFQTKTLVID NKTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDMTKR
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS
Arabidopsis Description
RABA4DRABA4D [Source:UniProtKB/TrEMBL;Acc:A0A178V6M2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.