CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87831	Sorghum	cytosol	66.35	68.32
VIT_10s0003g01620.t01	Wine grape	cytosol	55.77	66.67
Zm00001d005612_P001	Maize	cytosol	55.77	52.25
KRG93819	Soybean	cytosol	42.31	46.32
GSMUA_Achr7P23610_001	Banana	cytosol	49.04	28.81
Bra012576.1-P	Field mustard	cytosol	58.65	28.37
Zm00001d020102_P001	Maize	cytosol	53.85	27.86
CDY51631	Canola	cytosol	26.92	27.72
Bra025060.1-P	Field mustard	cytosol	56.73	27.31
CDX77609	Canola	cytosol, plasma membrane	56.73	27.31
CDY39445	Canola	cytosol	56.73	27.31
Os01t0667600-01	Rice	cytosol, golgi, plasma membrane, plastid	53.85	25.0
OQU80857	Sorghum	cytosol	45.19	21.76
EER97606	Sorghum	cytosol	44.23	20.72
Zm00001d032569_P001	Maize	plastid	31.73	19.64

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1Z5R1F7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlants:OQU77614	ProteinID:OQU77614
ProteinID:OQU77614.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF544	SMART:SM00175	EnsemblPlantsGene:SORBI_3009G079801	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI000B8B9707	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:10721176..10721559

Molecular Weight (calculated)

11864.4 Da

IEP (calculated)

8.203

GRAVY (calculated)

0.164

Length

104 amino acids

Sequence
(BLAST)

001: MAAGYRAEDD YDYLFKVSNL LSRFTRNEFS FESKSTIGVE FATRSLQVDG KVVKAQIWDT AGQERYVLFQ LVVDLICVSI RMLLLLPCVS SFQPFKHGAL
101: RFGL

Best Arabidopsis Sequence Match ( AT1G16920.1 )
(BLAST)

001: MAGYRVEDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATRTLKVDGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRRAT
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN

Arabidopsis Description

RABA1BRABA1b [Source:UniProtKB/TrEMBL;Acc:A0A178WJV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.